Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0375 ATGTGTGGTGGTGCCATCATCGCCAACTTCATCACCCGCCACCGTGGCTGCCGCCTTACCGCCTCTGACATCTGGCCCCACTCTTTCGGTAAGCCAAATGACGATGACTCCGACTTTGACCTCCATTTTCCTCATCACTCCGTCTCCCGCAAATCATCCCATCCTTCCCCAGTTGATCAGGAAGCCGAGAAGCCCGTGAAGAGGCAGAGGAAGAACCTCTATCGTGGTATCAGGCAGCGTCCCTGGGGTAAATGGGCTGCGGAGATTCGCGACCCCAGGAAGGGGGTTCGTGTTTGGCTTGGTACGTTCAACACTGCTGAAGAAGCCGCCAGGGCCTATGACAGTGAAGCTCGGAAAATCCGCGGCAAGAAAGCCAAAGTTAATTTTCCCAATGAAGACGATTCATACTCCCTTCAGGCTCGTCGTAATAATCCCCCGCCTCCACCCCGATCCCCAATATCTCCACTGTACCCACAGCAGTACTGCTCAAACTTGAACAACGTGCCTATAAGTTTCAATTTGGAGTTTGGCTATGATCTGAACCAGGCGGGCACAGTTCCTTCCCTTGGATTCGACACCGATCCAACTCTTGTTTCTGGAGAAGAGAATTCTGGATCTGGTTCCGAGGGCGCCTACTCCACGACACAATTCCTGGCCTCGAGTCAGACAGGAAACGGCTATTCCTCTCAGAGTTCGAATGTGGGCGTGGAAGGAAAAGCGAACGAGGTGCTCATCGAAGCCGAGGAAGAGAAGAACGAGATACAGAAGCTGTCGGATGAGCTGATGGCGTACGAGAACTACATGAAGTTTTATCAGATTCCATTTTATGACGGGCAATCGACGGCGTCCAACAATGCACAGGAAAACGTGGTGGGGGATCTGTGGCGCTTCGACGACGAGACCGTCCCGCCTTCGGTGACTGCATCGGCCCTGTGA 936 0.5353 MCGGAIIANFITRHRGCRLTASDIWPHSFGKPNDDDSDFDLHFPHHSVSRKSSHPSPVDQEAEKPVKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDSEARKIRGKKAKVNFPNEDDSYSLQARRNNPPPPPRSPISPLYPQQYCSNLNNVPISFNLEFGYDLNQAGTVPSLGFDTDPTLVSGEENSGSGSEGAYSTTQFLASSQTGNGYSSQSSNVGVEGKANEVLIEAEEEKNEIQKLSDELMAYENYMKFYQIPFYDGQSTASNNAQENVVGDLWRFDDETVPPSVTASAL 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0375 311 SUPERFAMILY DNA-binding domain 73 131 IPR016177 GO:0003677
Lele05g0375 311 MobiDBLite consensus disorder prediction 124 157 - -
Lele05g0375 311 FunFam Ethylene-responsive transcription factor 2 72 131 - -
Lele05g0375 311 MobiDBLite consensus disorder prediction 56 70 - -
Lele05g0375 311 ProSiteProfiles AP2/ERF domain profile. 73 130 IPR001471 GO:0003700|GO:0006355
Lele05g0375 311 Gene3D AP2/ERF domain 73 131 IPR036955 GO:0003700|GO:0006355
Lele05g0375 311 PRINTS Ethylene responsive element binding protein signature 74 85 IPR001471 GO:0003700|GO:0006355
Lele05g0375 311 PRINTS Ethylene responsive element binding protein signature 96 112 IPR001471 GO:0003700|GO:0006355
Lele05g0375 311 MobiDBLite consensus disorder prediction 36 71 - -
Lele05g0375 311 Coils Coil 240 267 - -
Lele05g0375 311 PANTHER DNA-BINDING DOMAIN 54 228 IPR044808 GO:0003700|GO:0009873
Lele05g0375 311 SMART rav1_2 73 136 IPR001471 GO:0003700|GO:0006355
Lele05g0375 311 CDD AP2 74 131 IPR001471 GO:0003700|GO:0006355
Lele05g0375 311 Pfam AP2 domain 74 122 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0375 Lele-ChrLele05 2142846 2143866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0375 1 182 AP2-EREBP Transcription Factor Family AT3G16770 43.062 8.69e-43 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele05g0375 AP2 1.2e-12 CL0081