Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0355 ATGGATACTGTGTGCTTAAAAAGTGGAATATCTGGGATAGCTCCGGCCACGTTAATAGGGGGCACATTGGATGTGAATTCGCATCCATCTCAAGTGAGCGTGCTGGTTCTTCCAGAGTTGGCGCGTGAAGCTCTGTGGACGGCGGATCAAGGGAAGGTAGAGGTGCGTAACGAGGGAATTGAAGGGAAGTGTCCGATTGATGATCGAAGAAATGAGTCTGGCGATGAAGACGATGAATGTGACGTGTGTACGGTTGATGACCATGACGAAGCAGATTTTCAATTCGACAGAGAATCGTTTTCAAGAATGCTTCGGAGGGTGTCTTTAACTGAAGCCAGATTGCATGCACAGCTCTCATACCTGGGTAACTTGGCCTACTCTATACCCAAAATCAAGACAAAACTGGCAACAACAACTGGAAAAAATAAGTCTTCGACTGATACTCAGGAAGTTGGAACTAATGAGAAAGACAACGGAGAAAGAAATGAGAAGAACAATACATATCATGTGTCTGTTGGTGGTGATTCTCTTGAGAGAAGCAGTGACAATTCTGCGGGTGATTATATGTTAAACACAAAAGTATCATCTGTGAAGGTTACTGATGATTCAGTAACAGAAGTGGTTGCAGATGATTTGAACTCAACGTCTCTATCACCTTGTGAATGGTATACATGTGATGATGACCAGAGTGGGTTCTGGGTCACTAGCATCCTGGCAGCAAGCATTCTTTTTGGGCCAGTTCAATTTGAGGGGTTCGATGTGCTTGTGCATCGAGGTATATACGAGGCTGCCAAAGGCATTTATCAGCAGATGTTACCAGAAGCGCATGATCACCTAAAACCACGAGGTTCTTTTGCAAAATTTCGTTTCACAGGGCATTATTTTCTTGGGGGAAGCTTGGCATTTCTTGTAAATCTGATGCTGCTGATAGGAAGCAATTACATTGCACAGAGACGTAGTATCACGAGCCTTTTCTTGCAATTGGCCCTAATAGCCTTGCAGAGCTACTCAAGGCTAATAATGCGAACTTTCGGAGTCATTCCTGTCTCGAGAACCCGCAGTGAGGCAAGAAAACAACTTCAAGCTGCTCGGCTGGCATTCTTGAACTCGCCTCATCCGCTTGAGATCTTAACTGACCGATGTGCTTATGGCTCCGGAGGAAACCATAATAAGAGATCATGA 1182 0.4475 MDTVCLKSGISGIAPATLIGGTLDVNSHPSQVSVLVLPELAREALWTADQGKVEVRNEGIEGKCPIDDRRNESGDEDDECDVCTVDDHDEADFQFDRESFSRMLRRVSLTEARLHAQLSYLGNLAYSIPKIKTKLATTTGKNKSSTDTQEVGTNEKDNGERNEKNNTYHVSVGGDSLERSSDNSAGDYMLNTKVSSVKVTDDSVTEVVADDLNSTSLSPCEWYTCDDDQSGFWVTSILAASILFGPVQFEGFDVLVHRGIYEAAKGIYQQMLPEAHDHLKPRGSFAKFRFTGHYFLGGSLAFLVNLMLLIGSNYIAQRRSITSLFLQLALIALQSYSRLIMRTFGVIPVSRTRSEARKQLQAARLAFLNSPHPLEILTDRCAYGSGGNHNKRS 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0355 393 MobiDBLite consensus disorder prediction 136 184 - -
Lele05g0355 393 MobiDBLite consensus disorder prediction 136 152 - -
Lele05g0355 393 MobiDBLite consensus disorder prediction 165 184 - -
Lele05g0355 393 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 63 136 IPR043367 GO:0008970
Lele05g0355 393 Pfam Lipase (class 3) 243 311 IPR002921 GO:0006629
Lele05g0355 393 Gene3D alpha/beta hydrolase 117 349 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0355 Lele-ChrLele05 2040062 2042472 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0355 358 387 Acyl Lipid Metabolism Gene Families AT1G02660 63.333 4.58e-06 47.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0355 05 2040062 2042472 Lele13g2108 13 27946260 27949446 CCT
Lele05g0355 05 2040062 2042472 Lele14g2034 14 26286793 26290048 CCT
Lele05g0355 05 2040062 2042472 Lele15g0302 15 1714652 1717844 CCT
Lele05g0355 05 2040062 2042472 Lele16g0314 16 1761415 1764681 CCT
Lele05g0355 05 2040062 2042472 Lele05g0355 05 2040062 2042472 ECH
Lele05g0355 05 2040062 2042472 Lele07g0372 07 2110581 2115131 hybridization
Lele05g0355 05 2040062 2042472 Lele08g0177 08 1094628 1097350 hybridization