Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0353 ATGAGGAGTGTTTGTGATTCAGAGGTGTTCGAGTCTAATCGCATAGTGAATGTAATTACGAAATATGTGCTCGCTTTAACAGGCGATAAGGGAGAGAGGGAAAGGGACCTTTGCAATTTCATGTTTCAATCCAACATTGAATCTTCTGCTACTCTATTCTTCATCTCCATCATTCGATCATGGCCGTCACTTCTCTCTCCCCCAACGCCTCCGACAAGAAGCACTGGTGGCTTACCAACCGTAAGGTTAATTAGCTTTCCCCGACTCTTTTCTTGCAATGTCTGTGATTTCGGTTTGGTTGCCATTGTTGAGAAATACATTAAAGACGCTCGCGCCCTGATTGCCACCCAAGAACAGAGCGAAATCGCTTCGGCTTTGAACCTTCTAGACGCGGCTCTGGCCATCTGTCCCCGCCAAGACAAAGCCCTGGAACTCAAAGCCAGGTCTCTTCTGTTCCTGCGGCAGTTCAAGGAGGTGGCCGATATCCTTCAGGACTACATCCCAAGCATCAAAATGACAAGCGAAGACTCGGCCTCCTTTTCTTCCCATAATTCGTCACAGCAGTTCTCGAGGGAGGGGGTGAAGCTCCTTTCGTCCTCGTCCGAGTTGCAGGGTCGGGATCAGAGTTTCAAGTGCTTCTCTGTATCGCACTTGAAGAAGAAAATAATGGCAGGGTTATGCAAAAGTTTTGACGAAGAAGGGCAATGGAGGTACTTGGTTCTGGCCAAAGCGTGCTGCCATCTAGGTCTAATGGAGGATGCAATGGTTCTTCTCCAAACGGGTAAACGTATTGCCGGCGACGCCTTACGCCGCGAAAGCATTTGCTGGTCTGATGACAGCTTCTTCTTATCCGCAATCACTTTCTCCGGGGGGGCCACCAACCCAACACCCTCCCATCCTCCCAAAACACCTCTCACCGAGTTCGAAGGCATCGCCCAACTTCTAAGCCACATCAAGCTCCTCATCCGACGTCGCACGGCCGCACTAGCCTCCCTCGAGTCCGGCCTCTACTCTGAAGCCATCCGTCATTTTTCCAAAATCGTTGAAGGCCGCCGCAGCGTGCCTCAAGGTTTTCTCGCCGAGTGTTATTTGCTCAGAGCCTCCTCCTACCGCTCCGCCGGTCGCATTGCAGAGTCTATTGCTGACTGTAATCGGACTCTGGCTCTCGACCCTTCTTGCATTCAAGCTCTTGAAACCAGAGCCTCCCTCCTGGAAACAATTCGATGTTTGCCGGATTGCTTGCACGATCTTGAACACTTGAAGCTTCTGTATAATTCGATCCTGCGGGATCGAAAGCTTCCCGGTCCTGCTTGGAAGCGTCATAATGTGAGGTACAGAGAAATTCCTGGGAAACTCTGCACTCTCACCACTAAAATCCAAGAACTGAAACGAAGAGTGGCTTCTGGAGAAACTAATAACGTGGATTACTACGCTCTGATCGGGTTGCCACGTGGGTGTTCTCGGTCGGAGTTGGAGAGAGCTCATCTATTGCTCTGCTTACGACACAAGCCCGATAAAGCTTTCAACTTTATTGATCGCTGCGAGCTAGCGGACGAACGTGATCTTGATTCGGTTAAGGAAAGAGCTAAAATGTCTGCATTGTTACTTTACAGATTGCTTCAGAAAGGGTACACAAGTATAATGGCAACGATCATGGAAGAGGAAGCAGCCGAAAAACAGAGAAAGAAAGCAGCAGCTGCATTGCTTGCCGCACAAGCAGCCGAGTGTTCAAGATTTGAGTCCAATTTGAATGTCTCAGAGAAATTGTGTGGCAATAGGAATACTTGTTCAGTAGAAAATAAACCCACAACAGTATCTTCTTCGATCGCGAATTCGTCGGTTTTCCAAGGTGTGTTTTGCCGGGATCTTGCTGCAGTCGGGAATTTGCTCTCGCAGCCTGGTTTTAACAATAATCCAATTCCGGTGAAGTATGAGGCATTGAGCTGTTAA 1950 0.4892 MRSVCDSEVFESNRIVNVITKYVLALTGDKGERERDLCNFMFQSNIESSATLFFISIIRSWPSLLSPPTPPTRSTGGLPTVRLISFPRLFSCNVCDFGLVAIVEKYIKDARALIATQEQSEIASALNLLDAALAICPRQDKALELKARSLLFLRQFKEVADILQDYIPSIKMTSEDSASFSSHNSSQQFSREGVKLLSSSSELQGRDQSFKCFSVSHLKKKIMAGLCKSFDEEGQWRYLVLAKACCHLGLMEDAMVLLQTGKRIAGDALRRESICWSDDSFFLSAITFSGGATNPTPSHPPKTPLTEFEGIAQLLSHIKLLIRRRTAALASLESGLYSEAIRHFSKIVEGRRSVPQGFLAECYLLRASSYRSAGRIAESIADCNRTLALDPSCIQALETRASLLETIRCLPDCLHDLEHLKLLYNSILRDRKLPGPAWKRHNVRYREIPGKLCTLTTKIQELKRRVASGETNNVDYYALIGLPRGCSRSELERAHLLLCLRHKPDKAFNFIDRCELADERDLDSVKERAKMSALLLYRLLQKGYTSIMATIMEEEAAEKQRKKAAAALLAAQAAECSRFESNLNVSEKLCGNRNTCSVENKPTTVSSSIANSSVFQGVFCRDLAAVGNLLSQPGFNNNPIPVKYEALSC 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0353 649 Gene3D Tetratricopeptide repeat domain 319 433 IPR011990 GO:0005515
Lele05g0353 649 Gene3D DnaJ domain 460 575 IPR036869 -
Lele05g0353 649 CDD DnaJ 475 507 IPR001623 -
Lele05g0353 649 SUPERFAMILY TPR-like 328 421 IPR011990 GO:0005515
Lele05g0353 649 SMART tpr_5 360 393 IPR019734 GO:0005515
Lele05g0353 649 PANTHER OS01G0273500 PROTEIN 102 649 - -
Lele05g0353 649 SUPERFAMILY Chaperone J-domain 471 509 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0353 Lele-ChrLele05 2026728 2029975 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0353 05 2026728 2029975 Lele13g2110 13 27958966 27963017 CCT
Lele05g0353 05 2026728 2029975 Lele14g2037 14 26308116 26310461 CCT
Lele05g0353 05 2026728 2029975 Lele15g0299 15 1700081 1702415 CCT
Lele05g0353 05 2026728 2029975 Lele16g0311 16 1740129 1742470 CCT
Lele13g2120 13 28016581 28016955 Lele05g0353 05 2026728 2029975 CCT
Lele15g0292 15 1650909 1651283 Lele05g0353 05 2026728 2029975 CCT
Lele16g0305 16 1694369 1694881 Lele05g0353 05 2026728 2029975 CCT
Lele05g0353 05 2026728 2029975 Lele05g0353 05 2026728 2029975 ECH
Lele05g0353 05 2026728 2029975 Lele07g0370 07 2093054 2095413 hybridization
Lele05g0353 05 2026728 2029975 Lele08g0174 08 1085452 1087857 hybridization