Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0351 ATGGCTTTGTTGACGTCGCCGTCGCCGGTTACAGTGTGCTTGGTGGTGATACTGGTGGGTGTGGTGGTGCAGAGAAGCGAGGCGGCGGAGCCTCTGGCCTGCGATCCCAGAGATGGCAACACCAAGAATCTGGCGTTTTGCAGGGTTTCACTGCCGATAGGGGAGAGGGTGAGGGATCTGATCGGGAGGTTGACGCTGGAAGAGAAGGTGAAGTTGCTGGGTGACAATGCGGCGGCGATTCCACGGGTTGGGATCAGAGGCTACGAGTGGTGGTCGGAGGCGCTTCACGGGGTTTCCAATGTGGGTCCCGGAACAAGGTTCGCTCCTCCATTCCCTGCCGCCACGAGCTTCCCTCAGGTCATCACCACCGCTGCTTCTTTCAATGGTTCCTTGTGGGAGGCCATCGGACGGGCCGTGTCAGACGAAGCAAGGGCAATGTATAATGGTGGAATGGCTGGGCTCACATTCTGGAGCCCAAACGTGAACATTTTCAGGGACCCGCGGTGGGGGCGAGGACAGGAGACTCCCGGTGAAGACCCTGTCCTAGCCGGTACATATGCCGCCAGTTACGTGAAGGGCCTCCAGGGAGAAGGCGGTAACCGGTTGAAGGTCGCCGCCTGCTGTAAGCACTTTACGGCCTATGACCTCGATAATTGGAACGGGGTGGATCGCTTCCATTTTAATGCACAGGTGAGCAAGCAGGACATAGAGGATACGTTCGATGTGCCATTCAGAATGTGTGTGAAGGATGGGAGGGTGGCCAGCGTCATGTGCTCTTACAATCAAGTCAATGGTGTCCCCACATGCGCCGATCCTAACCTCCTCAAGAAAACTGTTCGCGCCCAATGGCGTCTTGATGGATACATCGTATCGGACTGCGACTCTGTTGGGGTGCTCTTCGCTAGCCAGCATTATGCATCGTCCCCCGAAAACGCTGCCGCCTCTGCTATCAAAGCAGGATTGGATTTGGATTGTGGGCCTTTCTTGGGAATGCACACGCAAGATGCCGTGAAGAAAGGGTTGTTGAGCGAAGCGGACGTGAGCGGTGCCCTGGTGAATACCCTCACCGTCCAAATGAGGCTGGGGATGTTTGATGGAGAGCCCTCGGCTCAGCCATATGGCAATCTGGGTCCCGCCGACGTGTGCTCCAAGGCTCACCAAGACCTGGCTCACGAAGCCGCCGTACAGGGAATTGTTCTCCTCAAGAACTCCGACCCTTCTTTGCCCCTCTCTCAGCGTCGCCACCGCACTGTCGCCGTCATCGGCCCTAATTCTGATGCCTCTATTACCATGATTGGTAATTATGCCGGTGTTGCCTGCGGATACACGACTCCTTTACAAGGGATAGGGAGATACGCCAAGACCGTTCACCAAGAAGGTTGTGCGAATGTGGCTTGCGCGGATGACAAATTATTTGGAGCGGCTGTAAAAGCGGCCCGTCATGCTGATGCCACGGTCCTTGTAATGGGCCTGGACCAGTCCCTTGAGGCCGAAACTAGGGACAGGCCCACCTTGCTGATGCCTGGTCGTCAACAAGATCTTATTACCCAGGTGGCAGCCGCCTCCAAAGGCCCAACTATTTTGGTCCTCATGTCTGGCGGACCCCTTGACATAACTTTTGCAAAGAAAAATCCACGAATTGAGGGCATCTTGTGGGCCGGCTATCCTGGCCAGGCTGGTGGAGCCGCCATCGCAGATATCTTGTTCGGAGCCGCCAATCCAGGAGGGAAGCTGCCAATGACATGGTATCCACAAGAGTATCTCACAAACTTGCCGATGACCGATATGAGAATGCGAGCGAGCCAACCCACAGGGTACCCAGGAAGAACCTATCGATTCTACAAGGGCCCGGTGGTGTACCAATTCGGTCACGGATTAGGCTACAGCCAGTTCGTGCACACGTTGGCAAGTGCTCCGACGTTGGTGTCGGTTCCGGTGGACGGGCATCGCAAGGTCAACACCACAGACATTTCAAACAAGGCAATAAGGGTGACGCACGCGAGATGCGGAAAGCTGTCCATGACCCTTCACGTAGATGTTAAGAATACGGGCTCTAAGGATGGCACTCATGCCTTGTTAGTGTTCTCGGCGCCACCCTCTGGGTCTCATTGGGCCCCGCATAAGCAATTGGTGGCTTTTCAGAAGGTACATGTCCCAGCCAAGGCTCAGCAACGAGTCCAAGTCAACATTCACATTTGCAAATTCCTGAGCGTGGTGGATAAATCTGGAATTCGAAGGATTCCATTGGGCTCACACAGTCTCCACGTTGGGGATCTCAGACACTCCGTGTCACTTCAAGCTCAGAACCTTGGGATCATCAAGAACTGA 2328 0.5524 MALLTSPSPVTVCLVVILVGVVVQRSEAAEPLACDPRDGNTKNLAFCRVSLPIGERVRDLIGRLTLEEKVKLLGDNAAAIPRVGIRGYEWWSEALHGVSNVGPGTRFAPPFPAATSFPQVITTAASFNGSLWEAIGRAVSDEARAMYNGGMAGLTFWSPNVNIFRDPRWGRGQETPGEDPVLAGTYAASYVKGLQGEGGNRLKVAACCKHFTAYDLDNWNGVDRFHFNAQVSKQDIEDTFDVPFRMCVKDGRVASVMCSYNQVNGVPTCADPNLLKKTVRAQWRLDGYIVSDCDSVGVLFASQHYASSPENAAASAIKAGLDLDCGPFLGMHTQDAVKKGLLSEADVSGALVNTLTVQMRLGMFDGEPSAQPYGNLGPADVCSKAHQDLAHEAAVQGIVLLKNSDPSLPLSQRRHRTVAVIGPNSDASITMIGNYAGVACGYTTPLQGIGRYAKTVHQEGCANVACADDKLFGAAVKAARHADATVLVMGLDQSLEAETRDRPTLLMPGRQQDLITQVAAASKGPTILVLMSGGPLDITFAKKNPRIEGILWAGYPGQAGGAAIADILFGAANPGGKLPMTWYPQEYLTNLPMTDMRMRASQPTGYPGRTYRFYKGPVVYQFGHGLGYSQFVHTLASAPTLVSVPVDGHRKVNTTDISNKAIRVTHARCGKLSMTLHVDVKNTGSKDGTHALLVFSAPPSGSHWAPHKQLVAFQKVHVPAKAQQRVQVNIHICKFLSVVDKSGIRRIPLGSHSLHVGDLRHSVSLQAQNLGIIKN 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0351 775 Pfam Glycosyl hydrolase family 3 C-terminal domain 398 628 IPR002772 GO:0004553|GO:0005975
Lele05g0351 775 Pfam Glycosyl hydrolase family 3 N terminal domain 113 352 IPR001764 GO:0004553|GO:0005975
Lele05g0351 775 FunFam probable beta-D-xylosidase 7 56 370 - -
Lele05g0351 775 SMART Fn3_like_2 690 760 IPR026891 -
Lele05g0351 775 FunFam probable beta-D-xylosidase 2 383 629 - -
Lele05g0351 775 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 398 631 IPR036881 GO:0004553|GO:0005975
Lele05g0351 775 SUPERFAMILY (Trans)glycosidases 45 397 IPR017853 -
Lele05g0351 775 PANTHER SUGAR HYDROLASE-RELATED 24 763 IPR044993 GO:0009044|GO:0045493
Lele05g0351 775 Pfam Fibronectin type III-like domain 692 758 IPR026891 -
Lele05g0351 775 Gene3D - 383 629 IPR036881 GO:0004553|GO:0005975
Lele05g0351 775 Gene3D - 56 372 IPR036962 GO:0004553|GO:0005975
Lele05g0351 775 FunFam Probable beta-D-xylosidase 2 653 772 - -
Lele05g0351 775 Gene3D Immunoglobulins 651 772 IPR013783 -
Lele05g0351 775 PRINTS Glycosyl hydrolase family 3 signature 204 220 IPR001764 GO:0004553|GO:0005975
Lele05g0351 775 PRINTS Glycosyl hydrolase family 3 signature 117 136 IPR001764 GO:0004553|GO:0005975
Lele05g0351 775 PRINTS Glycosyl hydrolase family 3 signature 278 296 IPR001764 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0351 Lele-ChrLele05 2012306 2017464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0351 14 775 Glycoside Hydrolase AT1G02640 71.765 0.0 1166
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0351 05 2012306 2017464 Lele13g2113 13 27971705 27972325 CCT
Lele05g0351 05 2012306 2017464 Lele14g2039 14 26318213 26325342 CCT
Lele05g0351 05 2012306 2017464 Lele16g0310 16 1727790 1730378 CCT
Lele05g0351 05 2012306 2017464 Lele05g0351 05 2012306 2017464 ECH
Lele05g0351 05 2012306 2017464 Lele07g0369 07 2075362 2080604 hybridization
Lele05g0351 05 2012306 2017464 Lele08g0171 08 1071142 1075682 hybridization