Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0343 ATGGGGACTGATGAAGTATCGTTAGACGATAAAGCTAAGCGAACGAGGGATCTTCTCTTCAGTTTCTACTCTCAGTCTCAGGATCCTTCCGTGTCATCCAACTCCAGCATTGGCTCGTCCAGATCCCTCACTCTTGATGACATCAATTCCACCTCCTTCGATCCTGATCACTACATGACTAACCTGGTACAAAAGTCGAATTTGGAAGGTCTGCTGCAGACGCATGTTGAAATGGCTGCTGAAATAAAGAATCTCGACACTGACCTGCAAATGTTGGTCTACGAAAATTATAATAAGTTCATCAGCGCCACAGATACAATAGAGAGGATGAAAAGTAACATCTCCGGGATGGAGGCGAATATGGAACAGCTTCTTGAGAAGATAATGTCTGTGCAGTCGAGGAGTGACACGGTTAACACTTCTCTTTACGAGAAAAGAGAGCATGTAGAGGAACTGCATCGGACTTGCAATCTTCTTCGTAAAGTTCAGGAAAATGCATCAAATCAGAGGCCTATGCAAATGCAGTCAGGTTCTACACTGGAGCAATGCCAATCTTTAAGGTTGTGTGGGGCTGGCATGGCATATGGAGACTCATCATTCCAAGATTGCAAACGAGAATCTGAAAAAGCAATAGCTATCATAATAAATAATTTGCAGGTACAGTTATTTCTCCTTATTCTATCAGGCTTTCTATGCATGAGTCAAAACATAATGCCCATGTTATTTTCCGATTCAGAATCCATGCAAGCAAGATCTGAGGCTGCAGTGCTCCTTAAGCAGCTGGACTTTCCGGTGGAAAATTTGACGGCAAGGCTACTTGAGAAGTTGGAACAGTCTATTACAGACATTCAACTGAACCCTGAAGAGATAAACAATGCTTCAACGGATCCTTCTCCTTTTGCTTCTGCTCATGAGGCAGCTGTTCCAGAGTTTGTGGAGGCAGTTCATGTTTTTCCAGTAATATTTCCTGATTCAGAAAAGCAATTGAACAATCTTGCTCAAGATTTGATTACCAAGAACTTTATAATTACTGAGGAATATGTAAAGAGACGAATTTGTGCAGCTGATCTACTTGGTATTCTACGAGTTGTTTGTAATGATGTGCTCCTGATTGATGATGTCTTGGAGAAAGCTGCTCTCTCTGACCACACTATTGAGGCTTCTAAGGTTACTGTGAGGCTGTATGTTAGCAGTGCATTATCTCATCTTCTGCAAGATATATCAGTCCTGAAAAAGGAAAAAGTGGAGGATTACGCTCTGCAAGTTGCTCTAGATGCTAGCACCGAAACAGTTCTCCAAGGCAGCACAAATGTCTTGCTGGACTTCCGCAAAATTCTGGATGATAACTCAGGGCTAGTTGTTAGACTAAGAGAGATCATTATTGATATCGTTCAAGAAGAAGTACAAGATTTTTTCAGGCAACTTGAGGACAAGTTCCTTTTATTTTCTGGAAGAAATTTTGCTTCTTCCATTCAAGATCAGGGTATGACAGAGGGAGCTCAAGGTGACAAAGCTATTGCTGGCCTCATCCTAGGAATGCCTTGTGATTTTCAGGAAATAGCAGCTTCCTTTTCTGGTGGTAGTGCTAGAGTATATGAACACGGACCCGCCTTTGTTCCTGGAGAGATCTGTCGGAAATTTAGATCAGCAGTACATAAATATGAGAACTCAGAAGATATCATTTCTCCTGAAGAAGAAGGTTTAACACAACTAATTGGGTTAAGGAGCAACCCTTTGCGTGAAGAGAAACTCAGTAGGTCAAATACTCAGAGGGCGAGAAGCCAGCTTCTAGAGACACATTTAGCAAAACTGTTTAAGCAGAAGGTTGAAATATTCACCAAAGTAGAATCCACACAGGAGTCAGTTGTTACAACCATAGTGAAATTGTGCCTAAGAAGTCTACAAGAATTTGTTCGACTCCAGACTTTTAATCGTAGTGGATTCCAGCAAATTCAATTGGATATTCAGTTCCTAAGGGCTTCTTTAAGAGAAACAGTCGAGGACGAAGCCGCTATGGACTTCTTGCTTGATGAGGTGATTGTTGCTGCAGCAGAGCGTTGTCTTGACCCAGTTCCTTTGGAGCCCCCAATATTGGACAATCTTATACAAGCCAAGTTAGCAAAAACTAAGGAACATAACACAATATCTCCATGA 2154 0.4174 MGTDEVSLDDKAKRTRDLLFSFYSQSQDPSVSSNSSIGSSRSLTLDDINSTSFDPDHYMTNLVQKSNLEGLLQTHVEMAAEIKNLDTDLQMLVYENYNKFISATDTIERMKSNISGMEANMEQLLEKIMSVQSRSDTVNTSLYEKREHVEELHRTCNLLRKVQENASNQRPMQMQSGSTLEQCQSLRLCGAGMAYGDSSFQDCKRESEKAIAIIINNLQVQLFLLILSGFLCMSQNIMPMLFSDSESMQARSEAAVLLKQLDFPVENLTARLLEKLEQSITDIQLNPEEINNASTDPSPFASAHEAAVPEFVEAVHVFPVIFPDSEKQLNNLAQDLITKNFIITEEYVKRRICAADLLGILRVVCNDVLLIDDVLEKAALSDHTIEASKVTVRLYVSSALSHLLQDISVLKKEKVEDYALQVALDASTETVLQGSTNVLLDFRKILDDNSGLVVRLREIIIDIVQEEVQDFFRQLEDKFLLFSGRNFASSIQDQGMTEGAQGDKAIAGLILGMPCDFQEIAASFSGGSARVYEHGPAFVPGEICRKFRSAVHKYENSEDIISPEEEGLTQLIGLRSNPLREEKLSRSNTQRARSQLLETHLAKLFKQKVEIFTKVESTQESVVTTIVKLCLRSLQEFVRLQTFNRSGFQQIQLDIQFLRASLRETVEDEAAMDFLLDEVIVAAAERCLDPVPLEPPILDNLIQAKLAKTKEHNTISP 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0343 717 PANTHER UNCHARACTERIZED 7 550 IPR014812 -
Lele05g0343 717 Pfam Vps51/Vps67 48 133 - -
Lele05g0343 717 Coils Coil 107 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0343 Lele-ChrLele05 1945669 1952940 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2129 13 28065575 28068867 Lele05g0343 05 1945669 1952940 CCT
Lele14g2054 14 26396476 26401957 Lele05g0343 05 1945669 1952940 CCT
Lele15g0282 15 1599773 1605223 Lele05g0343 05 1945669 1952940 CCT
Lele05g0343 05 1945669 1952940 Lele05g0343 05 1945669 1952940 ECH
Lele05g0343 05 1945669 1952940 Lele07g0361 07 2003319 2010565 hybridization
Lele05g0343 05 1945669 1952940 Lele08g0165 08 1007828 1015368 hybridization