Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0342 ATGGCTTCGAATCACCGTCCAGCAAGTTCGGGATCTGATGACCCAAGATCTGATGTTGTGGACGAGAGGAAGAGGAAGAGGATGCAGTCTAACCGTGAATCCGCGAGGCGATCGCGGATGAAGAAGCAGAAGCAACTGGAAGATCTGACCAATGAGATCAGCCGATTGCAAAGTGCAAACAGTCAACTAGTTGAGAACATAAAGGAAAAGGAGGATACATACAATGAGATCGAATCCAACAATACTGTCCTTAGGGCGCAGACTACTGAGTTGTTCGAACGATTGCGTTTTCTGAACTCGATACTTGAGATCGCTGAAGAGGTCAGCGGCTTCTCTGTTGAGATCCCCGAGATACCAGATCCTCTCCTGAAGCCATGGCAGCTTCCTTATCCGATACAGCAGATCACCGCTTCTTCAAACTTCCTGTTCTGTTGGGTTCTGATGAGTCTGTTGGTGATCGTCTGGAGTGCTGTTGTTATTCTTCTTATGGTTTCTTCTCTTGGTGTACTTCGAAGATTAGCGGTACCGTGTTGTCTGGTCTTGGGAAATGTTGCCGTAAAACATACCAACTTGTCCTCATTACAGCCCTCCAATGGTGATTTGCAAGTCTCTAGCAGTTGCACAAGTTCGAAATATCGTTCAGTTCTGAGCTGA 654 0.4679 MASNHRPASSGSDDPRSDVVDERKRKRMQSNRESARRSRMKKQKQLEDLTNEISRLQSANSQLVENIKEKEDTYNEIESNNTVLRAQTTELFERLRFLNSILEIAEEVSGFSVEIPEIPDPLLKPWQLPYPIQQITASSNFLFCWVLMSLLVIVWSAVVILLMVSSLGVLRRLAVPCCLVLGNVAVKHTNLSSLQPSNGDLQVSSSCTSSKYRSVLS 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0342 217 MobiDBLite consensus disorder prediction 1 45 - -
Lele05g0342 217 Gene3D - 21 76 - -
Lele05g0342 217 MobiDBLite consensus disorder prediction 11 45 - -
Lele05g0342 217 FunFam BZIP transcription factor 21 72 - -
Lele05g0342 217 PANTHER BZIP TRANSCRIPTION FACTOR 44 8 107 - -
Lele05g0342 217 SMART brlzneu 19 83 IPR004827 GO:0003700|GO:0006355
Lele05g0342 217 Pfam bZIP transcription factor 23 81 IPR004827 GO:0003700|GO:0006355
Lele05g0342 217 Coils Coil 32 87 - -
Lele05g0342 217 SUPERFAMILY Leucine zipper domain 23 73 IPR046347 GO:0003700|GO:0006355
Lele05g0342 217 CDD bZIP_plant_GBF1 24 75 IPR045314 GO:0003700|GO:0006355
Lele05g0342 217 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 26 41 IPR004827 GO:0003700|GO:0006355
Lele05g0342 217 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 21 84 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0342 Lele-ChrLele05 1943836 1944676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0342 1 144 bZIP Transcription Factor Family AT3G62420 54.795 4.53e-48 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele05g0342 bZIP_1 7.3e-11 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0342 05 1943836 1944676 Lele13g2119 13 28014597 28015040 CCT
Lele05g0342 05 1943836 1944676 Lele14g2044 14 26347998 26348441 CCT
Lele05g0342 05 1943836 1944676 Lele15g0293 15 1654606 1655049 CCT
Lele05g0342 05 1943836 1944676 Lele16g0306 16 1697420 1697863 CCT
Lele13g2130 13 28073026 28076132 Lele05g0342 05 1943836 1944676 CCT
Lele14g2055 14 26403677 26406177 Lele05g0342 05 1943836 1944676 CCT
Lele15g0281 15 1593307 1596548 Lele05g0342 05 1943836 1944676 CCT
Lele16g0296 16 1639541 1650490 Lele05g0342 05 1943836 1944676 CCT
Lele05g0342 05 1943836 1944676 Lele05g0342 05 1943836 1944676 ECH
Lele05g0342 05 1943836 1944676 Lele06g0161 06 975025 975459 ECH
Lele05g0342 05 1943836 1944676 Lele07g0360 07 2001905 2003249 hybridization
Lele05g0342 05 1943836 1944676 Lele08g0164 08 1006112 1006546 hybridization