Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0340 ATGGGTACGGCAGACCTAATCCAGCCATCTTTGTTTAATGCAAATTGTGGAGCTTTTCTAGTTGCCGCACGACAGCTTTTGATGGCAGTATCGAAATATCATATATCGAAGTTGCGTTATTCCTTGCATGACACTTATGTTCTTCAATGTTTAAACAAGTCCGTTATGAGGCATCCAGGGCGGTTGGGTTCCGTACAAGACGAAGTAGTTGAGTTCCCAGGGAAAAACGATTTCTTTCAGGAACAGACTGATTCATATAAAAGTCAAATTAATCATCTGCAGCAAGATGCTCCCAAATTCGATACCCAAGTGTTAGAAGACTTCAACGTCGACCCTGCTCTTCAAATGACATCACCACCGTTTCAGGAAATCGTGGGGCTGAAGAATCAGGAAGTGCCAGGTTCAGAACTTGTTCTGTCTGAAGAAGACAACAGAGATGTTGAACTTGAGCAGTTTCTTCTTGCTGCGGTCGAGAGGGTGACTACTATAGGAATTGTTGGCCAACCCACCATAGAAGAAACAGGCAAAAGATGGACGAGTTTCGCTAAATCGTTGAACTTGCCATTACCGTATAAGCAAGTTTATGTTACAGACATGATCGAAGTTAAGGAACAACAGTTTGAAATTGAAGATGATGAAACTGTGGCTGTCTACGCTCCATATGTACTCAGGAATATGGTATCAAGGCCTGCTTGCTTGGAAAGCCTGATGAGTGTTATAAGAAATATCAAACCAACTATACTGTTAGTTCTTGAAGTGGAAGCCAATCATAATTCACCCTCATTTGCAATTCGCTTCACCGAAGCATTGTTCCACTACTCAGCTTTTTTTGATTGCCTTGAAACCTGCTTAAAGGATGAAAATAGGGTTAGAATGGCGACAGAAGCAATATTATATGAAGGTATACGAGACATTGTTGCCGCGGAAGGAAGAGAAAGAACAGTGAGGAATGTGAAGATAGAAGTATGGAGGAGGTTCTTTGCGAGGTATAGAATGGTGGAAATTGGATTTAGTGAGTCGTCTCTGTACCAAGCTAGCTTGGTGGCCAAAGAATTCGCTGTCGGCAAAATTTGCAGTCTAGACACAAATGAAAAATGA 1098 0.418 MGTADLIQPSLFNANCGAFLVAARQLLMAVSKYHISKLRYSLHDTYVLQCLNKSVMRHPGRLGSVQDEVVEFPGKNDFFQEQTDSYKSQINHLQQDAPKFDTQVLEDFNVDPALQMTSPPFQEIVGLKNQEVPGSELVLSEEDNRDVELEQFLLAAVERVTTIGIVGQPTIEETGKRWTSFAKSLNLPLPYKQVYVTDMIEVKEQQFEIEDDETVAVYAPYVLRNMVSRPACLESLMSVIRNIKPTILLVLEVEANHNSPSFAIRFTEALFHYSAFFDCLETCLKDENRVRMATEAILYEGIRDIVAAEGRERTVRNVKIEVWRRFFARYRMVEIGFSESSLYQASLVAKEFAVGKICSLDTNEK 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0340 365 Pfam GRAS domain family 159 353 IPR005202 -
Lele05g0340 365 ProSiteProfiles GRAS family profile. 1 365 IPR005202 -
Lele05g0340 365 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 159 349 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0340 Lele-ChrLele05 1935458 1937060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0340 159 356 GRAS Transcription Factor Family AT2G01570 29.064 2.49e-24 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele05g0340 GRAS 2.5e-39 CL0063