Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0338 ATGGATGGCACTGCATCCCCAAAACTTGACTCAGAAGCATCTCCAGAGCTCAACGCAAAAGAAGCTCAACCACTCAAAAAACGGAAAACAGTTCAGAGAACAGTTGTGATAGTGAGAGTTGGAGAAAATGAAGGCAAACTTAAGAACGAAGGGATGGCTCCTGATTCCTGGTGTTGGAGAAAATATGGACAAAAGCCTATTAAAGGATCTCCTTACCCAAGGGGCTACTACAGGTGCAGCACATCCAAGGGTTGTTCAGCCAGAAAGCAAGTAGAGAGATGCAGAACAGATGCTTCCATGCTCATCGTTACTTATACCTCTACTCATAACCATCCACCTCCTGCTCGTCCCTCCAACTCCAATCTAAACCTACCACAGAAATCCCAAAACCAGACCGTTGAAGATCTCCCAGCGACCTCGAAGGTGGAAGAGCAAGAAGTGAAAGAAAGGGAAAAGGATCATAAGCCAACGACGGGCCGTGATCAATGTGTGAAGGAAGCAAATTTCTATTACTTGCAACCGCCAACTCAGTGCTCTCAAGACATCATTGTTGACCAGGAAGATCCTTTCGAGGTGAACCCAGAGAAAACACGTGGTAGAATAGATCTCCTCGTAGAAAAAGGGCTACCGAGTTATTCTCAGTTCGAGAACCCGGCAACACCCAAATCCGAAGAACATGACTTTTTCGATGAACTTGAAGAGCTACCCATATCATCACCTTTCTTAAACTTAATGAGGAGAAATGTCTCAGAGGAAAGGATTGTGGTCGCCCCTTCATGA 780 0.4551 MDGTASPKLDSEASPELNAKEAQPLKKRKTVQRTVVIVRVGENEGKLKNEGMAPDSWCWRKYGQKPIKGSPYPRGYYRCSTSKGCSARKQVERCRTDASMLIVTYTSTHNHPPPARPSNSNLNLPQKSQNQTVEDLPATSKVEEQEVKEREKDHKPTTGRDQCVKEANFYYLQPPTQCSQDIIVDQEDPFEVNPEKTRGRIDLLVEKGLPSYSQFENPATPKSEEHDFFDELEELPISSPFLNLMRRNVSEERIVVAPS 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0338 259 MobiDBLite consensus disorder prediction 106 138 - -
Lele05g0338 259 MobiDBLite consensus disorder prediction 106 160 - -
Lele05g0338 259 Pfam WRKY DNA -binding domain 55 112 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele05g0338 259 MobiDBLite consensus disorder prediction 1 30 - -
Lele05g0338 259 FunFam WRKY transcription factor 65 27 114 - -
Lele05g0338 259 MobiDBLite consensus disorder prediction 139 160 - -
Lele05g0338 259 ProSiteProfiles WRKY domain profile. 48 114 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele05g0338 259 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 16 241 IPR044810 GO:0003700
Lele05g0338 259 SMART WRKY_cls 53 113 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele05g0338 259 Gene3D WRKY domain 44 115 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele05g0338 259 SUPERFAMILY WRKY DNA-binding domain 51 114 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0338 Lele-ChrLele05 1930406 1931432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0338 24 121 WRKY Transcription Factor Family AT1G29280 59.000 3.55e-35 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele05g0338 WRKY 7.3e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0338 05 1930406 1931432 Lele05g0338 05 1930406 1931432 ECH
Lele05g0338 05 1930406 1931432 Lele07g0356 07 1985874 1986897 hybridization
Lele05g0338 05 1930406 1931432 Lele08g0160 08 989758 990764 hybridization