Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0336 ATGGAGTTCAACAGAAAAATCATCCTCGTGGTTCCCCTGATCTGTTGCTCGCTCCTTTCCACCATTGACGCCGTTCCCTCGCATCGCTTCAAGCTGTCGGAAGAGCCTCCGACGGCAGCCCCAGCTTCGTCTCCCTCCGACGTCAAAGTCAGCACTGTGTATGTTAACACAGGGGCGTCGCAGCAAAACGCCCAGTTGGTAGCTCTGTGCAAGGACGCGGACGCGCCATCTCTGTGCGTGGAGACCATCGCGCCATTCATCCATGGCGCACTTGACCCCGTGGTGGCCGTTAAGGCCGAAATGGGGGCGACCATGAACATCACTTTGAAGGTGTCTGAAACAATCAAGACTTTGCGGGCCAAACCAACTCTCGCTTCAGACGACATAGCGTCACTGGGCATATGCGCAGACCAGTATGCTTCGATTGAGGATACCATAAATGATTGTTTGGATTCCATCAAGCAGAACGACGTGTACGGTGCTTGGATGAAGTTCTCGTCAGTGCTGTCTTTCCAACAGGCATGTGAAGATGCTTTTAAGGAAGGTGGCTCGCCCATTCCCTTCCCGGAGGATTCCAAGACTCTGTTCCAGTTGGGTGGTAATTGCTTGGCCATCCTCATGCATCTTTCTGGTGAAACCTCGTCTTATTAA 651 0.5284 MEFNRKIILVVPLICCSLLSTIDAVPSHRFKLSEEPPTAAPASSPSDVKVSTVYVNTGASQQNAQLVALCKDADAPSLCVETIAPFIHGALDPVVAVKAEMGATMNITLKVSETIKTLRAKPTLASDDIASLGICADQYASIEDTINDCLDSIKQNDVYGAWMKFSSVLSFQQACEDAFKEGGSPIPFPEDSKTLFQLGGNCLAILMHLSGETSSY 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0336 216 PANTHER PECTINESTERASE INHIBITOR-LIKE 46 210 - -
Lele05g0336 216 SMART PMEI_2 61 205 IPR006501 GO:0004857
Lele05g0336 216 Pfam Plant invertase/pectin methylesterase inhibitor 68 205 IPR006501 GO:0004857
Lele05g0336 216 Gene3D Invertase/pectin methylesterase inhibitor family protein 65 211 IPR035513 -
Lele05g0336 216 TIGRFAM PME_inhib: pectinesterase inhibitor domain 57 209 IPR006501 GO:0004857
Lele05g0336 216 CDD PMEI-like_2 63 205 - -
Lele05g0336 216 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 68 207 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0336 Lele-ChrLele05 1921540 1922190 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0336 05 1921540 1922190 Lele07g0354 07 1977083 1977733 hybridization
Lele05g0336 05 1921540 1922190 Lele08g0158 08 978361 978996 hybridization