Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0332 ATGAAAACTGAGGAAAACAAACAGAGAAAACGGGACATTGACACAAGCCGTGTATATATATTCCTTATAACTCAAGCAGTTGTAAAATGTGGCTTCCTCGAAAAATCTACCCATCTAGAGCAGTACGGCCAGGCACGAAGAAAATTGTCATTTAAAACAATAATTTCACTCGTTCCCCAGAACCAAATAGAAAAGACAAATGATGCTTACATATATCAATTGCTTTCACTCAAAAAAAGTAAAGCAAAGATTGTGGTGGCTGAATTTAATTTCTCAACCTCAGATCCTCGCCGTAGTACCTGCAGTGACAAAGATGAGATGCATGCACCTTTGGGTGGAAAAAATCTCCCGGTGTCAGCTCCTCAGCGTAGGAACGAAAAGAAAAACGTGGTTCTTGAGAATATGAGAAGAAAATCTCCCTCACGCCAACATTATGATCTAAAATGTCCGATTGTTTCTTCCATACGTATTGACAAGCAACCATTTTGTGTTTCTTCACAGCCTTCCCTTGTTCCCCTTTCCTTCAAAGATTTGATTAAGGCGACTGAAGCTGAAACCAAGAATATGCAGAGAAAAGTGATGGAATCCCAGAAGGAGTTGAGCAAGAAGAGCGTCAAGAGCAGAAGGAGAGGAAGGATTCTAATGAAGAGGAGGGCTTGCTTGATGGAAAGTTCTAGAAGACGAGCCAACAAGCTAGAGAGAAGAGTGACCAAGCTGAAGAGGCTCATACCCAACTGTGAGTCCATGGGATTGGATGGACTCTTCACAAAGACGGCCGATTACATTTTCACCTTGCAAACGAGAGTGAGAGTCATGCAGATTATGGTTGAGGTATTGACGGATTCTGAACAGTGA 855 0.4187 MKTEENKQRKRDIDTSRVYIFLITQAVVKCGFLEKSTHLEQYGQARRKLSFKTIISLVPQNQIEKTNDAYIYQLLSLKKSKAKIVVAEFNFSTSDPRRSTCSDKDEMHAPLGGKNLPVSAPQRRNEKKNVVLENMRRKSPSRQHYDLKCPIVSSIRIDKQPFCVSSQPSLVPLSFKDLIKATEAETKNMQRKVMESQKELSKKSVKSRRRGRILMKRRACLMESSRRRANKLERRVTKLKRLIPNCESMGLDGLFTKTADYIFTLQTRVRVMQIMVEVLTDSEQ 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0332 284 Coils Coil 179 199 - -
Lele05g0332 284 MobiDBLite consensus disorder prediction 97 127 - -
Lele05g0332 284 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 191 279 IPR044660 GO:0006355
Lele05g0332 284 CDD bHLH_AtIBH1_like 223 276 IPR044549 GO:0006355
Lele05g0332 284 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 216 265 IPR011598 GO:0046983
Lele05g0332 284 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 217 279 IPR036638 GO:0046983
Lele05g0332 284 Coils Coil 222 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0332 Lele-ChrLele05 1901937 1903429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0332 222 282 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G47270 54.839 2.78e-15 68.6