Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0323 ATGTACTTCTTACTACAAGGATGCGACTTGAGGGGCGAGGAGGTGTGGGTGCTATGTTTATGGGCAAGAAAGGGCAATGTGATTTTACGAAATGGTTGCTCCGTAGGAGTGTGCGAGTGGAGGAGATCTAGGGCTGCATGTCCACCACGTGGAGCGATGGTACGATCTGACGGTGGGGTAGGGTCACAGGATGCTTCTGGAAAAGGGTCCCCTGCATTGGACGAGGATAAGAAGATACGGTGCGTGGGGATCTGCACAGGGATTGAACAACAAGCCATGGACTGGACTATCTTAGTCATGTTAGCGTCATTTCTGTTTCGTGAGTACCACGTACGGCTGAAATTGAATTCTACGCGATTCATGATTGAGGGGGTTGAATTTTTTTGCAGGGAAGACTCATTTTATTCAGTTCAAACCAAACCCGCACCGTATGATTGGTTTACTTCAATTCATCTTCAAGATATAAACAAAATGTCCAAGTCGATGGCCGTAAGGCTCCATGTCGCGTTCCTCAGTCACACGGAGACGGAGTCCAATTCTTCCCTCCCTAGTCTTATTGACTTCTCAGCGTTTCTAGGAACAGGTTTCAAGATGATAGGGCAGTCTGCAGCAAATCAAAGTGAAGACGATATGTGCGTGAGGAAAGGTCCATGGACTGTTGAAGAGGACACCATTCTCGCCAATTACGTAATCACTCATGGCGAAGGTCGGTGGAATTTCGTCGCTCTCTGCTCAGGTCTGAATAGAACGGGCAAAAGTTGCAGATTGAGATGGCTGAACTACTTGCGTCCCGATGTGCGGCGGGGAAATATCACACTCCAGGAACAGATATTGATTCTCGACCTCCATTCTCGCTGGGGAAATAGGTGGTCTAAAATTGCGGAGCATTTGCCCGGAAGAACAGACAACGAGATAAAAAATTATTGGAGAACCAGAGTGATAAAGCAGGCGAAGCAGCTCAAGTGTGACGTCAACAGCAAACAGTTCAGAGACGCCATGAGTTACGTTTGGATCCCCCGCCTGCTGGAGCGGATTCGGGCCTCGTCCGAAGATCAACACGGTTCGGGAACGGAGTGGAGAAGACTCGATTACTCTTGCACCTCTATCTATGCGGGATCGGAGATCCACGTGGCTTCGAATTCGGACAGCAGCGAAACAACGGGACATCCAATAGGAAACGGGTCGGTGACCAAGACAGTAGAGCAGGGAGAGCCACCGGAGAATCTATGGAGCGATGAGAATATATGGTTTTTACGGCAACAACTTTGTGATGAGTTTTAA 1281 0.4871 MYFLLQGCDLRGEEVWVLCLWARKGNVILRNGCSVGVCEWRRSRAACPPRGAMVRSDGGVGSQDASGKGSPALDEDKKIRCVGICTGIEQQAMDWTILVMLASFLFREYHVRLKLNSTRFMIEGVEFFCREDSFYSVQTKPAPYDWFTSIHLQDINKMSKSMAVRLHVAFLSHTETESNSSLPSLIDFSAFLGTGFKMIGQSAANQSEDDMCVRKGPWTVEEDTILANYVITHGEGRWNFVALCSGLNRTGKSCRLRWLNYLRPDVRRGNITLQEQILILDLHSRWGNRWSKIAEHLPGRTDNEIKNYWRTRVIKQAKQLKCDVNSKQFRDAMSYVWIPRLLERIRASSEDQHGSGTEWRRLDYSCTSIYAGSEIHVASNSDSSETTGHPIGNGSVTKTVEQGEPPENLWSDENIWFLRQQLCDEF 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0323 426 ProSiteProfiles Myb-like domain profile. 263 313 IPR001005 -
Lele05g0323 426 MobiDBLite consensus disorder prediction 379 408 - -
Lele05g0323 426 CDD SANT 272 311 IPR001005 -
Lele05g0323 426 ProSiteProfiles Myb-like domain profile. 214 262 IPR001005 -
Lele05g0323 426 CDD SANT 217 262 IPR001005 -
Lele05g0323 426 Pfam Myb-like DNA-binding domain 215 262 IPR001005 -
Lele05g0323 426 Pfam Myb-like DNA-binding domain 268 311 IPR001005 -
Lele05g0323 426 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 212 376 IPR044676 GO:0003700|GO:0006355|GO:0043565
Lele05g0323 426 Gene3D - 272 313 - -
Lele05g0323 426 FunFam Myb transcription factor 215 267 - -
Lele05g0323 426 FunFam MYB transcription factor 272 335 - -
Lele05g0323 426 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 210 262 IPR017930 -
Lele05g0323 426 MobiDBLite consensus disorder prediction 50 73 - -
Lele05g0323 426 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 263 317 IPR017930 -
Lele05g0323 426 SUPERFAMILY Homeodomain-like 213 309 IPR009057 -
Lele05g0323 426 MobiDBLite consensus disorder prediction 379 404 - -
Lele05g0323 426 Gene3D - 215 267 - -
Lele05g0323 426 SMART sant 267 315 IPR001005 -
Lele05g0323 426 SMART sant 214 264 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0323 Lele-ChrLele05 1841571 1846181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0323 213 355 MYB Transcription Factor Family AT1G48000 72.028 2.04e-73 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele05g0323 Myb_DNA-binding 2.7e-15 CL0123