Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0294 ATGGAAAACCAACAACAACAACGCCTTGAATTGACCTCCACTAGCTCCGGCGACTTTCTCCGCCAGAATTTAGATCCAATAAACGACGACCCCGTCGATCTTCCTATCATCAAAGAAATGGATTTCTTCTCTTGTGCTTCACCTGGTAAATCTTTTGAGACTAGAAATGAGCAGCACCAAGATCCTGACTACAGGATCAATCACGATGGATCATCAAGTGCTCTCTCACCTGATCGCCCCGTCAACACTAGACTGAATTTGAACTGCGCAAGTCCTGGAATGCCAAGATTCGAAAACGATCAGGAGAAGCTCGACACTGAACTGAGTACAATTCAAGGCGAATTGCGTAGGCTGCATGAAGAGAATCAGAAGTTGAGAAATGTGCTGGAACAGATCACGAAAAGCTATAACCAACTGCAGGCATATCTCTTTATCGCTTTGAATAAACAAAAGGCTCAGAATGTTGAAGCAAATGGGATGTTGTCGGGGCAACCAAAATTGGACCCACGGCAGTCTACCAAATTAGACGCGAATAATTCGGGTTCAGACGACAAGACTCAAGAGCTTTCAGCCTCTCCTTCATCAAACAATGCGGAGGTCATGTCAAGGCAACGTGACCACCAACACCAATCACCTAAACTTCTAGGAAAGCAAGCAGCTTGCCCTGAAACTATTTCCAACCCCCAAGATCTCAAAAGCCAAGAACCAAAGCCGGATATTAATTTCAGAAAAGCCAGGGTTTCTGTACTTGCAAGATCAGAAGCTCTTCTGATTACCGATGGATGTCAATGGAGGAAATATGGTCAAAAAATGGCCAAGGGTAACCCTTGCCCTCGCGCCTACTATCGCTGTACTTTGGCCGTTGGATGCCCCGTTCGTAAGCAGGTGCAAAGATGTGCTGAAGACAAGACGGTGCTGATAACCACGTACGAAGGGAATCACAACCACCCTCTCCCACCGGCGGCCACCGCCATGGCAAATACGACATCGGCAGCCGCAGCGATGCTTCTATCAGGTTCAACTATGAACAATGAAGACTTAGTAAATTCAGGTGGAGGGTACTTGTCGTCTATGCCCTACGCTTCAATGGCAACCCTATCAGCCTCTGCACCTTTTCCTACTATCACTCTGGACTTGACTCAGACCCCTAACAGCGTGCAGCTTCACCAGCCTCCGTCCCATGGGGTTACGTTTCCTCTGTCATTGCAAGGTCACCCACTGGACGGTCATCTGAAGCCACCGTTAGGGCAGCAACAGCAGCCTTCTATGGTTGAGACGATGAGTGCAGCTATTGCCTCTGATCCGAACTTCACAGCGGCGCTGGCGGCGGCGATTTCTTCTGTCTTTGGGAGTAATTTGAATAGCGACGGTGGGAGTGGAAGTGGAAATGCTATTCCCCCTAACGGGATTTCTGCGCCGCCTCTGCTTCCTCCGTACTGCACTACATTCTCCACCAACTAG 1461 0.4873 MENQQQQRLELTSTSSGDFLRQNLDPINDDPVDLPIIKEMDFFSCASPGKSFETRNEQHQDPDYRINHDGSSSALSPDRPVNTRLNLNCASPGMPRFENDQEKLDTELSTIQGELRRLHEENQKLRNVLEQITKSYNQLQAYLFIALNKQKAQNVEANGMLSGQPKLDPRQSTKLDANNSGSDDKTQELSASPSSNNAEVMSRQRDHQHQSPKLLGKQAACPETISNPQDLKSQEPKPDINFRKARVSVLARSEALLITDGCQWRKYGQKMAKGNPCPRAYYRCTLAVGCPVRKQVQRCAEDKTVLITTYEGNHNHPLPPAATAMANTTSAAAAMLLSGSTMNNEDLVNSGGGYLSSMPYASMATLSASAPFPTITLDLTQTPNSVQLHQPPSHGVTFPLSLQGHPLDGHLKPPLGQQQQPSMVETMSAAIASDPNFTAALAAAISSVFGSNLNSDGGSGSGNAIPPNGISAPPLLPPYCTTFSTN 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0294 486 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 98 456 IPR044810 GO:0003700
Lele05g0294 486 SUPERFAMILY WRKY DNA-binding domain 252 319 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele05g0294 486 SMART WRKY_cls 258 318 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele05g0294 486 MobiDBLite consensus disorder prediction 49 81 - -
Lele05g0294 486 MobiDBLite consensus disorder prediction 160 201 - -
Lele05g0294 486 MobiDBLite consensus disorder prediction 1 22 - -
Lele05g0294 486 Coils Coil 101 142 - -
Lele05g0294 486 MobiDBLite consensus disorder prediction 160 219 - -
Lele05g0294 486 Gene3D WRKY domain 243 320 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele05g0294 486 ProSiteProfiles WRKY domain profile. 253 319 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele05g0294 486 Pfam WRKY DNA -binding domain 260 317 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele05g0294 486 FunFam probable WRKY transcription factor 31 243 320 - -
Lele05g0294 486 MobiDBLite consensus disorder prediction 67 81 - -
Lele05g0294 486 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0294 Lele-ChrLele05 1657328 1659839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0294 100 449 WRKY Transcription Factor Family AT4G04450 43.284 1.16e-81 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele05g0294 WRKY 7.9e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0294 05 1657328 1659839 Lele07g0312 07 1721290 1723773 hybridization
Lele05g0294 05 1657328 1659839 Lele08g0111 08 671770 674723 hybridization