Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele05g0294 | ATGGAAAACCAACAACAACAACGCCTTGAATTGACCTCCACTAGCTCCGGCGACTTTCTCCGCCAGAATTTAGATCCAATAAACGACGACCCCGTCGATCTTCCTATCATCAAAGAAATGGATTTCTTCTCTTGTGCTTCACCTGGTAAATCTTTTGAGACTAGAAATGAGCAGCACCAAGATCCTGACTACAGGATCAATCACGATGGATCATCAAGTGCTCTCTCACCTGATCGCCCCGTCAACACTAGACTGAATTTGAACTGCGCAAGTCCTGGAATGCCAAGATTCGAAAACGATCAGGAGAAGCTCGACACTGAACTGAGTACAATTCAAGGCGAATTGCGTAGGCTGCATGAAGAGAATCAGAAGTTGAGAAATGTGCTGGAACAGATCACGAAAAGCTATAACCAACTGCAGGCATATCTCTTTATCGCTTTGAATAAACAAAAGGCTCAGAATGTTGAAGCAAATGGGATGTTGTCGGGGCAACCAAAATTGGACCCACGGCAGTCTACCAAATTAGACGCGAATAATTCGGGTTCAGACGACAAGACTCAAGAGCTTTCAGCCTCTCCTTCATCAAACAATGCGGAGGTCATGTCAAGGCAACGTGACCACCAACACCAATCACCTAAACTTCTAGGAAAGCAAGCAGCTTGCCCTGAAACTATTTCCAACCCCCAAGATCTCAAAAGCCAAGAACCAAAGCCGGATATTAATTTCAGAAAAGCCAGGGTTTCTGTACTTGCAAGATCAGAAGCTCTTCTGATTACCGATGGATGTCAATGGAGGAAATATGGTCAAAAAATGGCCAAGGGTAACCCTTGCCCTCGCGCCTACTATCGCTGTACTTTGGCCGTTGGATGCCCCGTTCGTAAGCAGGTGCAAAGATGTGCTGAAGACAAGACGGTGCTGATAACCACGTACGAAGGGAATCACAACCACCCTCTCCCACCGGCGGCCACCGCCATGGCAAATACGACATCGGCAGCCGCAGCGATGCTTCTATCAGGTTCAACTATGAACAATGAAGACTTAGTAAATTCAGGTGGAGGGTACTTGTCGTCTATGCCCTACGCTTCAATGGCAACCCTATCAGCCTCTGCACCTTTTCCTACTATCACTCTGGACTTGACTCAGACCCCTAACAGCGTGCAGCTTCACCAGCCTCCGTCCCATGGGGTTACGTTTCCTCTGTCATTGCAAGGTCACCCACTGGACGGTCATCTGAAGCCACCGTTAGGGCAGCAACAGCAGCCTTCTATGGTTGAGACGATGAGTGCAGCTATTGCCTCTGATCCGAACTTCACAGCGGCGCTGGCGGCGGCGATTTCTTCTGTCTTTGGGAGTAATTTGAATAGCGACGGTGGGAGTGGAAGTGGAAATGCTATTCCCCCTAACGGGATTTCTGCGCCGCCTCTGCTTCCTCCGTACTGCACTACATTCTCCACCAACTAG | 1461 | 0.4873 | MENQQQQRLELTSTSSGDFLRQNLDPINDDPVDLPIIKEMDFFSCASPGKSFETRNEQHQDPDYRINHDGSSSALSPDRPVNTRLNLNCASPGMPRFENDQEKLDTELSTIQGELRRLHEENQKLRNVLEQITKSYNQLQAYLFIALNKQKAQNVEANGMLSGQPKLDPRQSTKLDANNSGSDDKTQELSASPSSNNAEVMSRQRDHQHQSPKLLGKQAACPETISNPQDLKSQEPKPDINFRKARVSVLARSEALLITDGCQWRKYGQKMAKGNPCPRAYYRCTLAVGCPVRKQVQRCAEDKTVLITTYEGNHNHPLPPAATAMANTTSAAAAMLLSGSTMNNEDLVNSGGGYLSSMPYASMATLSASAPFPTITLDLTQTPNSVQLHQPPSHGVTFPLSLQGHPLDGHLKPPLGQQQQPSMVETMSAAIASDPNFTAALAAAISSVFGSNLNSDGGSGSGNAIPPNGISAPPLLPPYCTTFSTN | 486 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele05g0294 | 486 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 98 | 456 | IPR044810 | GO:0003700 | |
Lele05g0294 | 486 | SUPERFAMILY | WRKY DNA-binding domain | 252 | 319 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Lele05g0294 | 486 | SMART | WRKY_cls | 258 | 318 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lele05g0294 | 486 | MobiDBLite | consensus disorder prediction | 49 | 81 | - | - | |
Lele05g0294 | 486 | MobiDBLite | consensus disorder prediction | 160 | 201 | - | - | |
Lele05g0294 | 486 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Lele05g0294 | 486 | Coils | Coil | 101 | 142 | - | - | |
Lele05g0294 | 486 | MobiDBLite | consensus disorder prediction | 160 | 219 | - | - | |
Lele05g0294 | 486 | Gene3D | WRKY domain | 243 | 320 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Lele05g0294 | 486 | ProSiteProfiles | WRKY domain profile. | 253 | 319 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lele05g0294 | 486 | Pfam | WRKY DNA -binding domain | 260 | 317 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lele05g0294 | 486 | FunFam | probable WRKY transcription factor 31 | 243 | 320 | - | - | |
Lele05g0294 | 486 | MobiDBLite | consensus disorder prediction | 67 | 81 | - | - | |
Lele05g0294 | 486 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele05g0294 | Lele-ChrLele05 | 1657328 | 1659839 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele05g0294 | 100 | 449 | WRKY Transcription Factor Family | AT4G04450 | 43.284 | 1.16e-81 | 258 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Lele05g0294 | WRKY | 7.9e-24 | CL0274 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele05g0294 | 05 | 1657328 | 1659839 | Lele07g0312 | 07 | 1721290 | 1723773 | hybridization | |
Lele05g0294 | 05 | 1657328 | 1659839 | Lele08g0111 | 08 | 671770 | 674723 | hybridization |