Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0293 ATGGCATCCTCTTTCTTCTTCTTCATCTTCTCAACCTCCTTACTCTGTTATCCCTACTTTGCATCCTTGGGAGCCGAGGCTCGTCATGATCCCTGTTCTGTTCCATCTCTCATAAGCAAAAAGCTCTTTAAAACCATCTTCCCTCACAAAGATGACTCAGCATGCCCTGCCAAGGACTTCTACACTTACAAGTCTTTCATTCACGCGGCCAAACACTTCCCTGAATTTGGCACCACCGGAAATATAACCACGCGAAAGCTTGAGATAGCTGCCTTTCTTGCTCAGATCTCCCACGAGACCACCGGTGGGTGGGCCACTGCCCCCGATGGACCCTTTGCCTGGGGCTTGTGCTTCAAGGAAGAACTCAAACCTCAGAGTAATTACTGTGACTCGAACAACACTCAATGGCCTTGTTACCCTGGCAAAAGTTACTTTGGCAGAGGACCCATTCAACTCTCTTGGAACTTTAATTATGGGCCAGCGGGGAAGGCTTTGGGATTTGATGGGTTGAGGAATCCCGAGATGGTATCGAACAATTCTGAGATTGCGTTTAAAACGGCTCTGTGGTTTTGGATGACAGAACGAGAGCCGGTACCTTCTCCCCACAACGTGATGGTTGGGAAATATGTGGCGACAAAAGCTGATATAGCGGCTAATCGTACGGCTGGGTATGGGTTAGTAACCAACATAATCAACGGCAGATTGGAGTGTGGAATCCCTAACGACGCCAGAGTGAAGGATCGGATTGGGTTCTTCCAAAGATATGCCAAATTGTTTAACGTAGACACGGGGCCTAATTTGGATTGTGCTCATCAGAAATCATTTTAA 828 0.4758 MASSFFFFIFSTSLLCYPYFASLGAEARHDPCSVPSLISKKLFKTIFPHKDDSACPAKDFYTYKSFIHAAKHFPEFGTTGNITTRKLEIAAFLAQISHETTGGWATAPDGPFAWGLCFKEELKPQSNYCDSNNTQWPCYPGKSYFGRGPIQLSWNFNYGPAGKALGFDGLRNPEMVSNNSEIAFKTALWFWMTEREPVPSPHNVMVGKYVATKADIAANRTAGYGLVTNIINGRLECGIPNDARVKDRIGFFQRYAKLFNVDTGPNLDCAHQKSF 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0293 275 PIRSF Endochitinase 11 275 IPR016283 GO:0004568|GO:0005975
Lele05g0293 275 SUPERFAMILY Lysozyme-like 34 275 IPR023346 -
Lele05g0293 275 CDD chitinase_GH19 38 269 - -
Lele05g0293 275 FunFam Endochitinase (Chitinase) 120 178 - -
Lele05g0293 275 ProSitePatterns Chitinases family 19 signature 1. 55 77 IPR000726 GO:0004568|GO:0006032|GO:0016998
Lele05g0293 275 Pfam Chitinase class I 37 269 IPR000726 GO:0004568|GO:0006032|GO:0016998
Lele05g0293 275 Gene3D Endochitinase, domain 2 120 178 - -
Lele05g0293 275 Gene3D - 41 275 - -
Lele05g0293 275 PANTHER CHITINASE-RELATED 30 273 - -
Lele05g0293 275 ProSitePatterns Chitinases family 19 signature 2. 182 192 IPR000726 GO:0004568|GO:0006032|GO:0016998
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0293 Lele-ChrLele05 1650556 1651478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0293 14 275 Glycoside Hydrolase AT1G02360 67.300 1.71e-136 386
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0293 05 1650556 1651478 Lele07g0311 07 1713794 1716951 hybridization
Lele05g0293 05 1650556 1651478 Lele08g0110 08 660820 664631 hybridization