Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0292 ATGGGGAAAGCCTCTAGCTCTTCTTCTTCCTCTATCAGCAGCAACAACCACCCACTCATCTCCACCGCTTCATCTCTCACCCGCCTCCATAGCTCTGACTTTCCTACAGATCTCAGGCTTGGTCTTAGCATTTCTGCAACTCAACATGTTGGCTCTTCTGTTTCAAGGGGGCAAGCAACGGATTGGATCCCAAACCAGCGAGCTCATCATGCGGCAGAAGTAAATGATTGTGGCGATCATAGCAGCTTGTTTGTAAAGGTGTACATGGAAGGAATTCCAATAGGAAGAAAACTCAATCTGGTAGCTCACGATGGCTACCATGAGTTAGTGAGGACTCTGGAAAACATGTTTGACACGACCATTCTCTGTAAACTCCCAAATCTGATCACTAATGTTCCTATCAACAGTGAAGAGATTGAAGATAACGAGGGTAGACTCATTCTGGTGTTAGGCAATTTCAGGAATGACAGGGCAGTCTCTGGATTTGGTGGTTTTCCAATTTTGTCCTTATAG 513 0.4542 MGKASSSSSSSISSNNHPLISTASSLTRLHSSDFPTDLRLGLSISATQHVGSSVSRGQATDWIPNQRAHHAAEVNDCGDHSSLFVKVYMEGIPIGRKLNLVAHDGYHELVRTLENMFDTTILCKLPNLITNVPINSEEIEDNEGRLILVLGNFRNDRAVSGFGGFPILSL 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0292 170 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 35 125 IPR003311 GO:0005634|GO:0006355
Lele05g0292 170 Pfam AUX/IAA family 69 125 IPR033389 -
Lele05g0292 170 Gene3D - 77 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0292 Lele-ChrLele05 1646232 1647131 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lele05g0292 AUX_IAA 1.9e-13 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0292 05 1646232 1647131 Lele14g2101 14 26639379 26640302 CCT
Lele05g0292 05 1646232 1647131 Lele16g0256 16 1420123 1421014 CCT
Lele05g0292 05 1646232 1647131 Lele07g0310 07 1708888 1709786 hybridization
Lele05g0292 05 1646232 1647131 Lele08g0109 08 657531 658330 hybridization