Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0285 ATGAGCAGAAACATGAAGCTGTCTCTGTTGTTCTTTGGTTTCGTTTACTCTGTTTCTGGGTTTGTTCTCGATGCGTCCCAAACTGAGGGACACTCTGTGTTTTCTTACATAGAAAACGATATCGTCACAGCACGCTCACCTTCCTCCTCCCAAGCTCTCATGGTCAACCTCACTCTTATTGAAACTGCGGTATCTAAAGGGGCCGTGTGTTTGGACGGAACGCTGCCAGGTTATCATTTGGATCCTGGATTTGGATCCGGTGCAAATAGTTGGCTCGTTGAATTGGAGGGTGGAGGATGGTGCCATAACATCAGGACTTGTGTTTATAGAAAAACTACTCGTCGTGGTTCCTCAAGCTACATGGAAAAGCAAATACCATTCACGGGAATATTGAGCAATAAAGCTGAAGAAAATCCAGACTTTTTCAACTGGAACCGGGTCAAATTACGGTACTGTGATGGGGCTTCCTTCAGTGGAGATAGTCAGAACGAGGCTGCACAGCTTCAATTCCGAGGGCAAAAAATATGGCTTGCCGCTATGGAGGAGTTAATGTCCAAGGGAATGCAGAACGCTGGGCAGGCTCTCCTGTCTGGATGCTCTGCTGGCGGTCTGGCTGCCATACTACATTGTGATGAGTTTAATAGCTTGTTTCCAAACTCTACCAAAGTCAAATGTTTGAGTGATGCAGGATTTTTTCTTGACGCAGCCGATGTATCTGGGTGGCGTACTATGAGGAACATGTTTGCAGGTGTTGTTCAGTTACAGGAAGTGCAAAAGAATTTGCCAGAAAGTTGTCTCAGCCAACTTGATCCAACTTCGTGTTTCTTCCCTCACAACTTGGTCAATCACGTAAAGACTCCATTATTTCTACTTAATGCAGCCTATGATTCATGGCAGGTTCAAGCCAGTTTAATACCAGCTTCAGCTGACCCCATGGGCTCTTGGAATGACTGCAAATCAAATCATGCAAATTGTAACTCATCTCAGATTCAGTTCCTCCAAGACTTCAGAACTCAAATGCTAAATGCCTTGCACGATTTCTCAAAGGAAGCTCAAGCTGGATTGTTCATAAATTCTTGCTTTTCTCATTGCCAATCTGAGAGGCAGGAATTATGGTTCTCAGATAACTCTCCTCTCCTTACGGGCAAGCCTATTGCACTTGCTGTTGGAGACTGGTATTTCGATAGGGACGCTTTCAAGGCTATTGACTGTGCTTATCCCTGTGACAACACTTGCCACAATCTGGTTTTCAATTGA 1257 0.4479 MSRNMKLSLLFFGFVYSVSGFVLDASQTEGHSVFSYIENDIVTARSPSSSQALMVNLTLIETAVSKGAVCLDGTLPGYHLDPGFGSGANSWLVELEGGGWCHNIRTCVYRKTTRRGSSSYMEKQIPFTGILSNKAEENPDFFNWNRVKLRYCDGASFSGDSQNEAAQLQFRGQKIWLAAMEELMSKGMQNAGQALLSGCSAGGLAAILHCDEFNSLFPNSTKVKCLSDAGFFLDAADVSGWRTMRNMFAGVVQLQEVQKNLPESCLSQLDPTSCFFPHNLVNHVKTPLFLLNAAYDSWQVQASLIPASADPMGSWNDCKSNHANCNSSQIQFLQDFRTQMLNALHDFSKEAQAGLFINSCFSHCQSERQELWFSDNSPLLTGKPIALAVGDWYFDRDAFKAIDCAYPCDNTCHNLVFN 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0285 418 PANTHER NOTUM-RELATED 53 414 IPR004963 GO:0016787
Lele05g0285 418 Pfam Pectinacetylesterase 49 397 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0285 Lele-ChrLele05 1601042 1603837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0285 14 417 Carbohydrate Esterase AT1G57590 66.259 0.0 587
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0285 05 1601042 1603837 Lele13g2170 13 28335414 28338924 CCT
Lele05g0285 05 1601042 1603837 Lele14g2108 14 26671919 26676620 CCT
Lele05g0285 05 1601042 1603837 Lele15g0241 15 1339803 1350628 CCT
Lele05g0285 05 1601042 1603837 Lele16g0250 16 1384956 1388476 CCT
Lele05g0285 05 1601042 1603837 Lele07g0302 07 1658784 1661576 hybridization
Lele05g0285 05 1601042 1603837 Lele08g0104 08 616253 619390 hybridization