Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0281 ATGGGTCGAATTGTTTGGGGCTTGGCTGGGAATATGGGGATGACGATGCATGGTCACGTGAGCAATCATGGGTTGGTTGAGGGATTGATGAGCATATCAGAATCAGGGGCATTTGCAATAATGGGTAACGGCACTTCACGTGTTGTTGGCTGTTTAGTGCCATTTAATGGCAAAAACGGAGTTGATTTGGAGTTCCTGGAGCAACTAGATGAAGGATTAGGTCATTCTTTCTGTTATGTGCGGCCATCTATTTTTGAATCTCCTGCCATTACACCATCAAACTCTGAGAGGTTTACTGTTGATTCGAGTACCCTTGATTCTGAAACTTTTAGTGGATCGTTTAGGCATGACAGTATGGAAGATCCCTCTGGCATACACAAACCGGCCAAGTGCTTCCCAGAGACCACATTCAAAACGATTTCAGGGGCTTCAGTCAGTGCCAATGTCTCAACCGCAAGGACTGGTAACCAGAGTGCATTATTTTCTAGTGATGCTCAAGAGCCAGCTGCATCATTTGAGGGAACTTCTTCATTTGCTGCAATCCCTTTGCAACCTGTCCCCCGTGGTTCTGGAACTTCAAATGGTTTCATGTCTGGACCTCTAGAGAGAGGCTTTGCTTCAGGTCCATTGGATAGGGGTGGCGGTGTTTTCATGTCTGGACCAATAGAGAAGGGAGTCATGTCAGGTCCTCTTGATTCCACTGACAAATCCAACTTTTCTGCACCGCTTGCACGAAGCGGTCGTAGGCCACGTCTCCAACAGCTCATGAGGAGTGTGAGTGGACCGATGAAAAACACTTTTTCCCGGACCTTCTCTAAGCATTCTGGTGGTGGCAGTTGGATGCAGCGGTTGTTCTTTCACCCAGTGACCCAATTGGCTTGGCATTCCAAAGATGCAAAGTTTCGACAAGAAGTCTCGAGAAACTGTATTGAAGTTGGACCGTCTGAAGGGGATTATAAGCATTCACATAATTTACAGTGGGCTCATGGCAAGGCTGGTGAAGATAGGGTTCATGTAGTACTTTCTGAAGAACAAGGGTGGTTGTTTATTGGGATATATGATGGTTTTAGTGGACCAGATGCTCCTGATTTTTTGATGAACCAACTTTATAGATTTGTAGACAAAGAACTGGAAGGGTTGCTTTGGGATTATGAAGTTAGTCCTGTAGATCCGCTTCACCGTGAAATCCCTAAAACTGGAAACGCTGTGGTTGCTCCCGAGTGCAGTCGGGAGGAACTGTCAGTTAATCATACTAATTCCAACCAAGATACTTTGTGTTGTTTAGAGGCTTCGTTTGGTCCAGAAAATGCCAAGGAGCAAACATCTTGCACTGAGATACTTGAGGAAAACGTTGCATTTAAGGTAAATATTGAAAACCCGTTACCTAATTCTGGAAGTCCCAGTAACTCAGATGCTGTTCTCCCTTCTGTTCCATTTGGACAGTTAAGTGGTCAAGGTAGAAAAAGCATGCGGCTTTATGAGCTACTTAAGATGGAATCTTGGAATGAACGAGATTCCTGGTCTGTCTTAGAACAAGGCAAGGATTCTTATGTTCCTAAAGAATCAACTCAGGTAGGGTGTATGAGATCTTGTTCAGCTAATGCAAACGAAGGTTGTTCTAGACATCTGGACGAAGCTCCCACCACATCAGGAGAAAATGGAGGGGTTGGGTCTGAATCAGTTAGTCAAGAGTCTGTAACTGCATTTACTGTTCTGGGACAAAGGCAGAATACCAGAAAGTCATTTCTTGGTACCAAAATTAAAAAAATGTACAGGAAGCAGAAGTCCTTGCGTAAGAAGCTTTTTCCTTGGAGCTATGATTGGCATAGGGAAGAAACTGGTGTTGATGAGAAAATATTAGACGTCTCAGAACCCATTAGAAAATGTAAATCTGGAGTAGTTGATCATGATGCAGTTTTAAGAGCAATGACTCGAGCTCTTGACAGAACAGAAGAGGCATACATGGAAATGGTGGAGAATAATCTAGAAAAAAATCCAGAGCTTGCTTTAATGGGATCATGTGTTTTAGTGATGCTGATGAAGGATCAAGATGTTTATGTCATGAACCTGGGGGATAGTCGTGTAATTTTGGCTCAAGAAAGGCCGAATGATCGTCATCCTAATTCAAGTTTTGTTAAGGATGATGTGAGGTATAGAAACCGATCCAGAGAGTCATTAGTACGGATGGAGCTGGATAGAATCTCGGAGGAGTCCCCAATTCACAATCAAAACAGTCATGTTCACAAGATGAACAAAAATAGAGAGATAGCAATTTGCAGTTTAAAAATGAGAGCTGTTCAGCTTTCCACTGATCACAGCACAAGTGCTGAAGAGGAAATTTTCAGAATAAGGGCAGAACACCCTGATGATACCCAATCCATTTTTAATGATAGAGTGAAAGGACAATTAAAAGTCACCAGAGCATTTGGTGCTGGATTCCTGAAGAGGGCATCTTTTAATGAAGTTCTACTAGAGAGGTTCCGAGTTGATTATGTGGGCGCTGCTCCTTACCTAAGTGGCACTCCTTCTATTCTGCATCACCGACTTTCTTCTAGTGATCGGTTCTTGGTACTCTCCTCCGACGGACTTTACCAGTACTTCAGCAATGAAGAGGTAGTTGCCCACATTACTTGGTTCATGGAAAATGTGCCTGAAGGCGATCCTGCACAAGACCTGATTGCAGAGCTTCTCTTCCGTGCTGCTAAAAAGAATGGAGAACTGGAAGTTCCCGTAAAGGAGTTAAGCATACTACATAATCATCTTCTGTCACTATTTCACGATGATTACACTATCAGCAGCTGCATGGTAACTGCAAATGATCCTCTCTGTTCCGTCTCCTTTACCTTGGCTTCTGATCCCGACTTTCTTCAAGACCTTTGCGTCGCCCTTCCCCCTTCAGGAGTGAAGGTGAATGGTTTTGCGTGCAAAAACGAGGGAAACGTGACAGCAGATGATTTCTTCTTCGCCGGGATAGCAGAGCCCGGTATGATCAACAACACAGTGGGTTCATTGGTGACTGGAGCGAACGTGGAGAAAATCGCAGGGCTTAACACTTTGGGTGTGTCTTTGTCCAGAATCGACTTCAAACCCGGTGGCCTTAACCCGCCCCACACCCACCCTCGTGCCACAGAGATGGTGTTCGTCTTGGAAGGAGAATTGGATGTGGGCTTTGTCACGACATCTAACAAGCTCATTTCCAAGAACATCAAGCAAGGCGAGGTCTTCGTCTTCCCCAAGGGCCTTCTTCACTTCCAGAAGAACAATGGCAACAAGCCTGCTTCTGTGATTTCTGCTTTCAATAGCCAGCTACCTGGTACCTTGTCTGTCGCTGCGGCTCTCTTCACGGCCACACCAGGTGTGCCTGATGATGTGCTCTCTCAAACCTTCCAGATTGCTACTAAAGAGGTCGACAAGATCAAATCCAAGCTTGCTCCGAAGAAGACTTGA 3447 0.4479 MGRIVWGLAGNMGMTMHGHVSNHGLVEGLMSISESGAFAIMGNGTSRVVGCLVPFNGKNGVDLEFLEQLDEGLGHSFCYVRPSIFESPAITPSNSERFTVDSSTLDSETFSGSFRHDSMEDPSGIHKPAKCFPETTFKTISGASVSANVSTARTGNQSALFSSDAQEPAASFEGTSSFAAIPLQPVPRGSGTSNGFMSGPLERGFASGPLDRGGGVFMSGPIEKGVMSGPLDSTDKSNFSAPLARSGRRPRLQQLMRSVSGPMKNTFSRTFSKHSGGGSWMQRLFFHPVTQLAWHSKDAKFRQEVSRNCIEVGPSEGDYKHSHNLQWAHGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMNQLYRFVDKELEGLLWDYEVSPVDPLHREIPKTGNAVVAPECSREELSVNHTNSNQDTLCCLEASFGPENAKEQTSCTEILEENVAFKVNIENPLPNSGSPSNSDAVLPSVPFGQLSGQGRKSMRLYELLKMESWNERDSWSVLEQGKDSYVPKESTQVGCMRSCSANANEGCSRHLDEAPTTSGENGGVGSESVSQESVTAFTVLGQRQNTRKSFLGTKIKKMYRKQKSLRKKLFPWSYDWHREETGVDEKILDVSEPIRKCKSGVVDHDAVLRAMTRALDRTEEAYMEMVENNLEKNPELALMGSCVLVMLMKDQDVYVMNLGDSRVILAQERPNDRHPNSSFVKDDVRYRNRSRESLVRMELDRISEESPIHNQNSHVHKMNKNREIAICSLKMRAVQLSTDHSTSAEEEIFRIRAEHPDDTQSIFNDRVKGQLKVTRAFGAGFLKRASFNEVLLERFRVDYVGAAPYLSGTPSILHHRLSSSDRFLVLSSDGLYQYFSNEEVVAHITWFMENVPEGDPAQDLIAELLFRAAKKNGELEVPVKELSILHNHLLSLFHDDYTISSCMVTANDPLCSVSFTLASDPDFLQDLCVALPPSGVKVNGFACKNEGNVTADDFFFAGIAEPGMINNTVGSLVTGANVEKIAGLNTLGVSLSRIDFKPGGLNPPHTHPRATEMVFVLEGELDVGFVTTSNKLISKNIKQGEVFVFPKGLLHFQKNNGNKPASVISAFNSQLPGTLSVAAALFTATPGVPDDVLSQTFQIATKEVDKIKSKLAPKKT 1148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0281 1148 Gene3D - 295 451 IPR036457 -
Lele05g0281 1148 MobiDBLite consensus disorder prediction 227 247 - -
Lele05g0281 1148 Gene3D - 567 938 IPR036457 -
Lele05g0281 1148 Gene3D Jelly Rolls 951 1145 IPR014710 -
Lele05g0281 1148 ProSiteProfiles PPM-type phosphatase domain profile. 318 914 IPR001932 -
Lele05g0281 1148 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 947 1142 - -
Lele05g0281 1148 FunFam Protein phosphatase 2C 32 295 466 - -
Lele05g0281 1148 Coils Coil 640 660 - -
Lele05g0281 1148 CDD cupin_OxOx 952 1143 - -
Lele05g0281 1148 SMART Cupin_1_3 989 1137 IPR006045 -
Lele05g0281 1148 PRINTS Germin signature 1037 1057 IPR001929 GO:0030145
Lele05g0281 1148 PRINTS Germin signature 1067 1087 IPR001929 GO:0030145
Lele05g0281 1148 PRINTS Germin signature 1100 1115 IPR001929 GO:0030145
Lele05g0281 1148 SUPERFAMILY PP2C-like 330 908 IPR036457 -
Lele05g0281 1148 SUPERFAMILY RmlC-like cupins 982 1143 IPR011051 -
Lele05g0281 1148 ProSitePatterns Germin family signature. 1032 1045 IPR019780 GO:0030145
Lele05g0281 1148 CDD PP2Cc 635 906 IPR001932 -
Lele05g0281 1148 SMART PP2C_4 318 936 IPR001932 -
Lele05g0281 1148 Pfam Cupin 990 1136 IPR006045 -
Lele05g0281 1148 Pfam Protein phosphatase 2C 757 905 IPR001932 -
Lele05g0281 1148 FunFam germin-like protein subfamily 2 member 1 951 1145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0281 Lele-ChrLele05 1578448 1586071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0281 41 931 PP2C-type Phosphatase Gene Family AT2G46920 60.268 0.0 1026