Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0279 ATGTTGCGGGAGTGGAGAACAAATCCCTCAGAATCACCAACAACCTTGTATGCATCAAATGCAATCCTAGGAGCTTTCATTAGTTCGACTTTGTTGCGTGTCTTTGTTTATGTCGTCGGACTCTGCTATCCTCAGCTACAACTCAATCAGCTTCTTCTTGGTCAAACTGAGTTATTGAGAGAGAAAACTGAGATATTGAGAGAGAAATTGAGGATGGAAAAGGTAGTACTGAGTGTTGTGATATTGTTCGTGGGGTTATCCACCACACAGCTAAGAACAGCAGCCGGGGCCGGCTGGCTGCGAGCACATGCAACTTTCTATGGAGGAAGCGACGCCTCAGGCACAATGGGAGGTGCATGTGGTTATGGGAATCTATACACGGATGGTTATGGGACAAAAACGGCAGCATTAAGCACAGCTCTGTTCAACGACGGGCAGGCCTGCGGCGGATGCTATCAGATAGTGTGTGACGGAACACAAGCTCCACAGTGGTGCCTGAGAGGGAGTTACATCACAATCACCGCCACAAATTTCTGTCCTCCGAACTACGCTCTTCCCAGCGACAATGGAGGTTGGTGCAATCCTCCCAGACCTCATTTTGACATGTCTCAGCCTGCTTTTGAGACTATCGCCAAGTACCGCGCCGGAATTGTTCCCGTTTTCTTCCGACGGGTTGGGTGCAGTAGAAGTGGAGGCGTCAGGTTTACCATAAATGGTAGAGACTATTTTGAGCTTGTTCTTATTAGCAACGTGGGAGGTGCTGGCGAAATCTCACGAGTTTGGATCAAAGGATCCAAAATGAGTAACTGGGCGTCCATGTCCAGGAATTGGGGTGCAAACTGGCAGAGCAATAACTATCTCAACGGTCAAAGCTTGTCTTTCAGAGTCCAACTCAGCAACGGAAAATATCGCACTGCTTATAACGTGGCACCCTCCAACTGGAGATTTGGCCAGTCCTTCGTTAGCAACGTTCAGTTCTGA 981 0.4852 MLREWRTNPSESPTTLYASNAILGAFISSTLLRVFVYVVGLCYPQLQLNQLLLGQTELLREKTEILREKLRMEKVVLSVVILFVGLSTTQLRTAAGAGWLRAHATFYGGSDASGTMGGACGYGNLYTDGYGTKTAALSTALFNDGQACGGCYQIVCDGTQAPQWCLRGSYITITATNFCPPNYALPSDNGGWCNPPRPHFDMSQPAFETIAKYRAGIVPVFFRRVGCSRSGGVRFTINGRDYFELVLISNVGGAGEISRVWIKGSKMSNWASMSRNWGANWQSNNYLNGQSLSFRVQLSNGKYRTAYNVAPSNWRFGQSFVSNVQF 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0279 326 Pfam Lytic transglycolase 134 221 IPR009009 -
Lele05g0279 326 PANTHER EXPANSIN-A15 80 322 IPR002963 GO:0009664
Lele05g0279 326 SMART dpbb_1 134 222 IPR007112 -
Lele05g0279 326 PRINTS Expansin/Lol pI family signature 215 231 IPR007118 GO:0005576
Lele05g0279 326 PRINTS Expansin/Lol pI family signature 270 284 IPR007118 GO:0005576
Lele05g0279 326 PRINTS Expansin/Lol pI family signature 116 134 IPR007118 GO:0005576
Lele05g0279 326 PRINTS Expansin/Lol pI family signature 98 113 IPR007118 GO:0005576
Lele05g0279 326 PRINTS Expansin/Lol pI family signature 308 322 IPR007118 GO:0005576
Lele05g0279 326 PRINTS Expansin/Lol pI family signature 138 156 IPR007118 GO:0005576
Lele05g0279 326 SUPERFAMILY PHL pollen allergen 229 321 IPR036749 -
Lele05g0279 326 FunFam Expansin 89 228 - -
Lele05g0279 326 SUPERFAMILY Barwin-like endoglucanases 98 250 IPR036908 -
Lele05g0279 326 Pfam Expansin C-terminal domain 233 311 IPR007117 -
Lele05g0279 326 PRINTS Expansin signature 279 300 IPR002963 GO:0009664
Lele05g0279 326 PRINTS Expansin signature 231 243 IPR002963 GO:0009664
Lele05g0279 326 PRINTS Expansin signature 171 181 IPR002963 GO:0009664
Lele05g0279 326 PRINTS Expansin signature 207 220 IPR002963 GO:0009664
Lele05g0279 326 PRINTS Expansin signature 243 264 IPR002963 GO:0009664
Lele05g0279 326 PRINTS Expansin signature 129 143 IPR002963 GO:0009664
Lele05g0279 326 PRINTS Expansin signature 308 324 IPR002963 GO:0009664
Lele05g0279 326 PRINTS Expansin signature 158 169 IPR002963 GO:0009664
Lele05g0279 326 PRINTS Expansin signature 190 207 IPR002963 GO:0009664
Lele05g0279 326 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 117 232 IPR007112 -
Lele05g0279 326 FunFam Expansin 232 326 - -
Lele05g0279 326 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 242 322 IPR007117 -
Lele05g0279 326 Gene3D - 232 326 IPR036749 -
Lele05g0279 326 Gene3D - 85 228 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0279 Lele-ChrLele05 1571652 1574929 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0279 72 326 Expansin Gene Family AT4G01630 73.828 1.01e-144 406