Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0265 ATGGCTTGGAGAGAGCTTGGAAGAAAGAGAATATATATGAACTTTGCCAGAGCTTTGACTGCAGTACCATCTAGGCATGTTGCACGGTCATGTTCTTCATCTACCTTTGTAGCAAAATCTGTTTATGCATCAGCAGGTTGCTTGAGTGAGCTTATCAGTCACTCATCTGCCGGAGCAGCTGGTTTTTGCAATGGAATAAAAGAACATGGAATACGATACCGGTGGTTTCATGCTAATCCAGAACTATGGGCGAGAAGAAATGAGGAGTTGTTTGGTTTGAAGACTCCAAAGAAGGAGAAGCGTGTGAGAAGGGACAGTAAAAGTCAACCCCCTGTTGAAGCTCCATATGTTCCTCGTAATGTGATCAAGTCTACCAAATCCGTTCCTGATAAAACAATTGAAATATTTGAAGGCATGACCATTGCTGAGCTGGCAAAGCGTACTGGAAAGTCAGCATCTTCTCTGCAAGGTATTCTAGTAAATGTTGGGGAAAAGGTTGAATCAGAGTTTGAGCCTCTCAGTGTCGATATTGCAGAACTTGTTGCAATGGAAGTGGGTGTCAATGTCAAGAGGCTACATTCTACTGAAGGTGCAGAGATTGCACCCCGGTCAGCAGTAGTAACGGTGATGGGTCATGTTGACCATGGTAAAACCTCCCTTCTCGATGCTTTGCGCCAAACATCAGTGGCAGCCAAGGAGGCTGGGGGTATAACTCAGCATCTAGGTGCCTTTGTGGTGGCCATGCCATCAGGAGCATCAATCACATTTCTGGACACACCTGGTCACGCTGCATTTAGTGCAATGCGGGCAAGAGGTGCTGCAGTTACAGACGTGGTGGTACTTGTTGTTGCTGCAGATGATGGTGTGATGCCTCAAACACTTGAAGCTATATCCCATGCAAAAGCAGCTAATGTACCGATAGTAGTTGCAATAAATAAATGTGATAAACCAGGAGCAAATCCTGAAAGAGTAAAACTTCAGCTTGCATCAGAGGGCTTGTTGCTGGAAGAGATGGGTGGGGATATTCAGGTGGTTGAAGTTTCTGCAACTATGAAAATTGGACTGGATAACTTGGAGGAAGCTTTGCTCCTTCAGGCTGAAATGATGGATCTAAAAGCTCAAATTGATGGCCCTGCTCAAGCTTATGTGGTAGAAGCAAGGCTTGATAAAGGACGAGGTCCATTAGTTACTGCTATTGTGAAGACAGGGACTCTAGTTTGTGGCCAGTATGTGGTTATAGGCTCAGAATGGGGCAAAATAAGGGCTATTAGAGAAGTGACGGGTAAGTTGACTGACAGAGCAACTCCTGCAATGCCTGTTGAGATTGAAGGGCTTCGGGGGACTCCCATGGCTGGTGATGATGTTATTGTTGTTCAATCAGAGGAGCGAGCACGATTGCTTAGTGCTGGTAGGAAAAGGAAATATGAGGAGGATAGGCTTAAAAAAATGGTCCAGGAAAAGACTAATTGTATGGAGTCATCTGAGGATGGTCCTCAGAGGGTTGAATTGCCAATAGTAGTGAAAGCTGATGTCCAGGGCACTGTTCAGGCTGTCACAGATGCGTTGAGAACTTTAAATAGTTCTCAGGTTTTCGTGAACGTTGTCCATGTTGGTGTAGGGTCTATTTCTCAATCTGATGTGGACCTAGCACAGGCTTGCGGTGCATGCATAGTTGGATTCAATGTGAAGAGTCCACCTAGTCCCGTTAGTCAGGCAGCAGGCCGTGCCAATATAAAGATAGTGCTGCACCGTGTGATTTACCATCTCTTGGAAGAGATAGGCAATTTGATAATAGAGAAGGCTCCAGGGACGTCAGAAACCCAGGTAGCCGGGGAGGCAGAGGTGCTGAGTATATTTGAGCTTAAAGGAAGGAGCAAGTCCAAGGGGCCCGATGTGAAGATAGCTGGGTGTCGGGTTATCGATGGTTGCGTGATGAAATCGGGAACCATGAGGCTTCTGAGGAGTGGGGAAGTGATGTTTGAAGGAAACTGTGCGTCTCTGAGAAGGGAAACGCAGGACGTGGAGGCAGTGAAGAAGGGAAGTGAGTGTGGACTGGTAATAACTGAGTGGCAAGATTTCCAGGTTGGAGATGTCATACAGTGCTTGGAACAAGTGGTGAGGAAGCCCAAGTTCATTAAGTCGCAGAGTGGAGCTGTTCGAATTGAGTGTTGA 2172 0.4632 MAWRELGRKRIYMNFARALTAVPSRHVARSCSSSTFVAKSVYASAGCLSELISHSSAGAAGFCNGIKEHGIRYRWFHANPELWARRNEELFGLKTPKKEKRVRRDSKSQPPVEAPYVPRNVIKSTKSVPDKTIEIFEGMTIAELAKRTGKSASSLQGILVNVGEKVESEFEPLSVDIAELVAMEVGVNVKRLHSTEGAEIAPRSAVVTVMGHVDHGKTSLLDALRQTSVAAKEAGGITQHLGAFVVAMPSGASITFLDTPGHAAFSAMRARGAAVTDVVVLVVAADDGVMPQTLEAISHAKAANVPIVVAINKCDKPGANPERVKLQLASEGLLLEEMGGDIQVVEVSATMKIGLDNLEEALLLQAEMMDLKAQIDGPAQAYVVEARLDKGRGPLVTAIVKTGTLVCGQYVVIGSEWGKIRAIREVTGKLTDRATPAMPVEIEGLRGTPMAGDDVIVVQSEERARLLSAGRKRKYEEDRLKKMVQEKTNCMESSEDGPQRVELPIVVKADVQGTVQAVTDALRTLNSSQVFVNVVHVGVGSISQSDVDLAQACGACIVGFNVKSPPSPVSQAAGRANIKIVLHRVIYHLLEEIGNLIIEKAPGTSETQVAGEAEVLSIFELKGRSKSKGPDVKIAGCRVIDGCVMKSGTMRLLRSGEVMFEGNCASLRRETQDVEAVKKGSECGLVITEWQDFQVGDVIQCLEQVVRKPKFIKSQSGAVRIEC 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0265 723 Gene3D Translation factors 375 494 - -
Lele05g0265 723 SUPERFAMILY Translation proteins 606 708 IPR009000 -
Lele05g0265 723 TIGRFAM IF-2: translation initiation factor IF-2 130 706 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Lele05g0265 723 FunFam Translation initiation factor IF-2 606 710 - -
Lele05g0265 723 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 495 610 IPR036925 -
Lele05g0265 723 Pfam Translation-initiation factor 2 482 593 IPR023115 -
Lele05g0265 723 SUPERFAMILY Translation proteins 376 458 IPR009000 -
Lele05g0265 723 FunFam Translation initiation factor IF-2 498 605 - -
Lele05g0265 723 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 94 718 IPR015760 -
Lele05g0265 723 Gene3D Translation factors 605 708 - -
Lele05g0265 723 Gene3D - 199 374 IPR027417 -
Lele05g0265 723 TIGRFAM small_GTP: small GTP-binding protein domain 205 357 IPR005225 GO:0005525
Lele05g0265 723 Gene3D - 499 603 IPR036925 -
Lele05g0265 723 Hamap Translation initiation factor IF-2 [infB]. 8 709 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Lele05g0265 723 CDD mtIF2_IVc 611 701 - -
Lele05g0265 723 FunFam Translation initiation factor IF-2 199 374 - -
Lele05g0265 723 CDD IF2_mtIF2_II 378 473 IPR044145 -
Lele05g0265 723 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 202 372 IPR000795 GO:0003924|GO:0005525
Lele05g0265 723 CDD IF2_eIF5B 206 369 - -
Lele05g0265 723 Pfam Elongation factor Tu GTP binding domain 207 363 IPR000795 GO:0003924|GO:0005525
Lele05g0265 723 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 202 372 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0265 Lele-ChrLele05 1491519 1495049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0265 203 687 Eukaryotic Initiation Factors Gene Family AT1G21160 28.187 4.22e-29 122
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0265 05 1491519 1495049 Lele07g0282 07 1542204 1545745 hybridization
Lele05g0265 05 1491519 1495049 Lele08g0086 08 506818 511218 hybridization