Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0257 ATGCCCCCACGCGGGTCCCACGACATGGAGCCAGATCCCTTACCGGGACGGGACACCAAGGGTCCAAGTCCTCCGCTCCGTGCCTTCCCCTCTGGGCCCCACTCCTCTTCCTCATCATTACTGTTAACTAACCCTGGAGGTCCAGTGCAAGGCTCTCCTTTCTGTGTTCTCCAGTGCTTCCGAGGTATGCTCAATTCAGAATTTGATTATTTATACAGAATGACTAAAGGGAAGTTTGATTCTAAAGAGAAAAACAACACATGTGCAACGGATCAATCTTCCGCACCGGAGAATGACTTTTTTGAGCTGGTTTGGGAAAATGGTCAGATATCGACGCAGGGTAAGTCAAGAAAAGCAAGAAAGAGCCCAGAAGTTGAGGAAGAATCAGTGGGCATTAAAAAGGCAACTCCGGTACGATGTACAAGTTCTAAGAGAAGTCGTGCAGCTGAAGTGCATAATCTATCTGAAAGGAGGCGAAGAGACAGGATCAATGAGAAGATGCGCGCATTACAAGAACTCATCCCAAATTGCAATAAGGTGGATAAAGCATCGATGCTGGATGAGGCAATTGAGTATCTTAAAACACTTCAACTCCAAGTTCAAATTATGTCAATGGGAGCTGGTTTATATGCGCCTCCAAATCCTATGATGTTACTCCCAGGAATGCAGCACATGCAGACACCACGTATGGCTTCATTCTCACCCATAGGAATTGGCATGCAAATGGGGTTGGGGATGGGTTGTGGGTTGAGCATGTCTGACATGAATAGTGGATCCCCTAGATTCCCAATGGTTCAGGTGCCCCAAATGCAAGGAACTCATTTCCCGGTTTTACCTATGCCTGGACCCACAGCTGGTTTATATGGGATGCCGAGATCAGGTCCTCAAGCATTCGGGTTTCCTGGTTGGGGACTTTACATGCCAATGCCAAATGCTCCTGGAGTCTCCATGCCAGGAGGGCCTCTAATGAACCCTTCGAGTTCAGGACAAAACGCCTTTGGAGCTGCAGGACTTGGGGAAACTGTGGATTCGGCTTCAGCCTCTAGTTTAAAGGATCCAATGCCAAATGTGAATTCACAAGTTATGCCAAGCACAGGTGGCAGTAACTCCACAGTGCAGATGTCTACTCAGTGTGAAGCAACGAATGTTCGAATTGATCAGACAGCACTAGTGCATAATAGCGGGCATACCTGCAATATTAATGACAGTGGAGCTACTAATCCTGGCAAAGAAGATAACCCTGTGATTGGTAAATCTCGTAATGACTGA 1269 0.4728 MPPRGSHDMEPDPLPGRDTKGPSPPLRAFPSGPHSSSSSLLLTNPGGPVQGSPFCVLQCFRGMLNSEFDYLYRMTKGKFDSKEKNNTCATDQSSAPENDFFELVWENGQISTQGKSRKARKSPEVEEESVGIKKATPVRCTSSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGLYAPPNPMMLLPGMQHMQTPRMASFSPIGIGMQMGLGMGCGLSMSDMNSGSPRFPMVQVPQMQGTHFPVLPMPGPTAGLYGMPRSGPQAFGFPGWGLYMPMPNAPGVSMPGGPLMNPSSSGQNAFGAAGLGETVDSASASSLKDPMPNVNSQVMPSTGGSNSTVQMSTQCEATNVRIDQTALVHNSGHTCNINDSGATNPGKEDNPVIGKSRND 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0257 422 MobiDBLite consensus disorder prediction 1 45 - -
Lele05g0257 422 MobiDBLite consensus disorder prediction 30 45 - -
Lele05g0257 422 FunFam Basic helix-loop-helix transcription factor 142 205 - -
Lele05g0257 422 SMART finulus 153 202 IPR011598 GO:0046983
Lele05g0257 422 MobiDBLite consensus disorder prediction 398 422 - -
Lele05g0257 422 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 144 209 IPR036638 GO:0046983
Lele05g0257 422 PANTHER TRANSCRIPTION FACTOR PIF3 71 123 IPR044273 GO:0003700|GO:0006355
Lele05g0257 422 MobiDBLite consensus disorder prediction 112 134 - -
Lele05g0257 422 CDD bHLH_AtPIF_like 147 209 - -
Lele05g0257 422 Pfam Helix-loop-helix DNA-binding domain 151 197 IPR011598 GO:0046983
Lele05g0257 422 MobiDBLite consensus disorder prediction 117 133 - -
Lele05g0257 422 Gene3D - 142 205 IPR036638 GO:0046983
Lele05g0257 422 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 147 196 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0257 Lele-ChrLele05 1430017 1436329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0257 122 224 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09530 77.143 2.56e-41 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele05g0257 HLH 3.9e-14 No_clan