Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0250 ATGGCTACAACTTTCTTTATTTCACGGTCTGTGTCTGATTGTAGAGAGCGCTCAGCTGCACAGTCCCTTGATAGAAGTGAAATCGGAAGAAATGGGTTAGGAGATGGGAATTCTTCGTCGGATTGGCAGGAATTGAAATTGAAACCTTGTGGGAGCAAATATGAGGATGTTCTAAGAGCCTCTTGCACTGTGGAGGATTCTGGGATTGTAGATCGCTTTAGTTGCTTGTTTCAAATGGATTCTCCATGGACCAATGGTTGGCAGGACAATGGTACTCATGACAGGAGGCAAATCAGAAAGGGGAAGGCATCCCAGGGATCCTATATTGAAGATTTGGCAGAGGATTTTCGATTGCCTATCAATCACAGGCCAACAGAAAACGTTGATCTAGACAATGTTGAACAAGCATCTCTTGACACACAGTTAACATCGTCTAATATTGGATTTAAGCTACTTCAAAAGATGGGGTGGAAAGGAAAGGGTCTGGGGAAGAATGAGCAAGGAATTATTGAGCCAATAAAATCTGGTATTAGAGATCCCAGATTGGGTGTGGGTAAACAAGAAGAAGATGATTTTTTCACTGCTGAAGAAAACATCCAGAGAAAGAAACTTGATGTAGAGTTGGAGGAGACAGAGGAAAATATGAGGAAACGAGAGGTTTTGGCTGAACGTGAGCAAAAAATTCAAACTGAAGTGAGTGAAATCCGAAAGGTGTTTTTTTGTGAACTCTGCAACAAGCAATACAAATTGGCCATGGAATTTGAAGCACACTTGAGCTCATATGATCACAATCACAGGAAGCGTTTCAAAGAAATGAAGGACATGCATGGTAGTAGCAGCCGAGATGATAGGCAAAAAAGAGAGCAGCAGCGTCAAGAAAGGGAAATGACTAAGTTTGCCCAAATGGCTGATGCTCAAAAGCAGCAACAGCTGCAACAACAAGAAGAATCTGGATCTGCTCCTGTTTCCTCTGAATATAGAACTGCTACTGCACTTGCAGAACAGGATCAGCGAAAGACTTTGAAGTTTGGGTTTGCCCCCAAGGGAAGTGCTTCCAAGAGCTCATTCGGTGGTGCTGCAAAGAAGCAAAAAGTTGCCATGTCTTCTATATTCGGTGCCGATGCTGATGAAGAATAA 1137 0.4274 MATTFFISRSVSDCRERSAAQSLDRSEIGRNGLGDGNSSSDWQELKLKPCGSKYEDVLRASCTVEDSGIVDRFSCLFQMDSPWTNGWQDNGTHDRRQIRKGKASQGSYIEDLAEDFRLPINHRPTENVDLDNVEQASLDTQLTSSNIGFKLLQKMGWKGKGLGKNEQGIIEPIKSGIRDPRLGVGKQEEDDFFTAEENIQRKKLDVELEETEENMRKREVLAEREQKIQTEVSEIRKVFFCELCNKQYKLAMEFEAHLSSYDHNHRKRFKEMKDMHGSSSRDDRQKREQQRQEREMTKFAQMADAQKQQQLQQQEESGSAPVSSEYRTATALAEQDQRKTLKFGFAPKGSASKSSFGGAAKKQKVAMSSIFGADADEE 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0250 378 Pfam Zinc-finger double-stranded RNA-binding 239 266 IPR022755 -
Lele05g0250 378 MobiDBLite consensus disorder prediction 22 42 - -
Lele05g0250 378 SMART G-patch_5 142 187 IPR000467 GO:0003676
Lele05g0250 378 ProSiteProfiles G-patch domain profile. 144 189 IPR000467 GO:0003676
Lele05g0250 378 Coils Coil 194 221 - -
Lele05g0250 378 PANTHER FINGER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G04180)-RELATED 79 378 - -
Lele05g0250 378 MobiDBLite consensus disorder prediction 302 335 - -
Lele05g0250 378 Pfam G-patch domain 145 185 IPR000467 GO:0003676
Lele05g0250 378 MobiDBLite consensus disorder prediction 272 300 - -
Lele05g0250 378 MobiDBLite consensus disorder prediction 272 365 - -
Lele05g0250 378 ProSitePatterns Zinc finger C2H2 type domain signature. 241 263 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0250 Lele-ChrLele05 1395874 1401643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0250 79 378 C2H2 Transcription Factor Family AT5G26610 65.789 2.64e-126 363