Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0239 ATGGGTGCTGATCTTAATGCCGAACTATCAAAGAAAACATCCCTTTTCGGGCTTGAAGTTTGGGAACTAATTGGAATTGCTGTTGGACTGTTTATAGCAGTTATCCTCGTGCTCTCTGTTTGCCTTACTTTGCGGAAGAAATCAAGAAAAGCCAAGGACAGGATTCCCCTTAACCAAATACCAACCATCCCGAAGGATATCAAGGAAGTGAGGGTTGAGCAAGTATCGGCAAATGGATTTGTTCCTCGTGATGGAATTCTTATCAGAATACATGATAAATCCAGTGACAAAGAATCAGACAAAGTTACGGTCCATTTGGGTTTGGGGAAGATGAAAAATGGGGACAGTAGCAGTTATTCTGACTCATTCAATCACTTAGAGAAAGACGGGGGTGGCTCACAGTCAGGAGAGGAAGGGAACTCTGGCACTTTCACAGTGTATAAGCACTCTTCTTCGTACCCTATAACAGCTCCTTCCCCTCTGTCTGGTCTCCCGGAGTTCTCTCACTTGGGTTGGGGCCACTGGTTTACATTGAGGGACCTTGAAATTGCCACGAACCGGTTTTCCAAAGAGAATGTGATTGGTGAGGGTGGCTATGGAGTTGTCTATCGGGGACAGCTGATCAATGGGAGTCCAGTGGCAATGAAAAAGATACTCAATAACATTGGTCAAGCTGAGAAAGAATTTAGAGTGGAAGTTGAAGCTATTGGCCATGTACGACATAAGAATTTGGTACGCCTTTTGGGGTTCTGCATTGAGGGGACGCACAGGATATTAGTCTATGAGTATGTCAATAATGGAAACTTGGAGCAATGGCTCCATGGAGCTATGCGTCATCATGGATATCTTACATGGGAAGCGCGAATGAAGATTCTTCTTGGCACGGCCAAAGCTCTTGCATATTTGCATGAAGCCATTGAGCCAAAGGTTGTGCACCGAGATATCAAGTCAAGCAACATATTAGTCGATGATGATTTTAATGCCAAGGTTTCTGATTTTGGCTTGGCCAAACTGCTGGGTGCTGGGAAGAGTCATGTCACAACACGAGTTATGGGAACCTTTGGGTATGTGGCTCCTGAATATGCAAATACTGGCCTTCTAAATGAAAAGAGTGATGTTTATAGCTTTGGTGTTGTGCTCTTGGAAGCAATCACGGGAAGAGATCCAGTTGACTATGGTCGACCAACTAATGAAGTTAATCTGGTTGATTGGCTGAAGATAATGGTTGGAAGCAGGCGATCAGAAGAAGTGGTTGACCTGAATATCGAGGTGAAGCCCTCCACCAGAGCTTTAAAACGAGCCCTCTTGACTGCATTGAGATGTGTAGATCCTGATTCTGAGAAGAGACCCAAGATGGGCCAAGTTGTGCGGATGCTGGAGTCCCATGAGTATCCCTTAGCTAGAGAGGACCGAAGGCACCGAAGAAATCGAGGGGACAATAGCATGGAAAGTGAATCCCAAAAAGAATATTCAGACACAGATAGATCAGAGAGCAGAGGATAA 1503 0.4491 MGADLNAELSKKTSLFGLEVWELIGIAVGLFIAVILVLSVCLTLRKKSRKAKDRIPLNQIPTIPKDIKEVRVEQVSANGFVPRDGILIRIHDKSSDKESDKVTVHLGLGKMKNGDSSSYSDSFNHLEKDGGGSQSGEEGNSGTFTVYKHSSSYPITAPSPLSGLPEFSHLGWGHWFTLRDLEIATNRFSKENVIGEGGYGVVYRGQLINGSPVAMKKILNNIGQAEKEFRVEVEAIGHVRHKNLVRLLGFCIEGTHRILVYEYVNNGNLEQWLHGAMRHHGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILVDDDFNAKVSDFGLAKLLGAGKSHVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVVLLEAITGRDPVDYGRPTNEVNLVDWLKIMVGSRRSEEVVDLNIEVKPSTRALKRALLTALRCVDPDSEKRPKMGQVVRMLESHEYPLAREDRRHRRNRGDNSMESESQKEYSDTDRSESRG 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0239 500 ProSiteProfiles Protein kinase domain profile. 188 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g0239 500 ProSitePatterns Serine/Threonine protein kinases active-site signature. 310 322 IPR008271 GO:0004672|GO:0006468
Lele05g0239 500 PANTHER OS01G0323000 PROTEIN 5 492 - -
Lele05g0239 500 Pfam Protein kinase domain 189 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g0239 500 ProSitePatterns Protein kinases ATP-binding region signature. 194 216 IPR017441 GO:0005524
Lele05g0239 500 FunFam Putative receptor-like serine/threonine-protein kinase 264 475 - -
Lele05g0239 500 SMART serkin_6 188 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g0239 500 SUPERFAMILY Protein kinase-like (PK-like) 172 467 IPR011009 -
Lele05g0239 500 Gene3D Transferase(Phosphotransferase) domain 1 264 476 - -
Lele05g0239 500 FunFam Putative receptor-like protein kinase 170 263 - -
Lele05g0239 500 Gene3D Phosphorylase Kinase; domain 1 170 263 - -
Lele05g0239 500 MobiDBLite consensus disorder prediction 459 500 - -
Lele05g0239 500 CDD STKc_IRAK 194 460 - -
Lele05g0239 500 MobiDBLite consensus disorder prediction 115 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0239 Lele-ChrLele05 1328981 1331438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0239 131 461 Trihelix Transcription Factor Family AT1G70460 46.884 2.31e-92 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Lele05g0239 Pkinase 5.9e-48 CL0016