Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0236 ATGCACATACTGGCAGATGCAGTTTGTAATTCCCGAGCTTTTGTATATTTCAATTACGATCTGCTTTACGAGATCGAAGATTTGGAAGGTCTAATAAAGGAACGCATTAACAGAATGCCGCTGGGGAAATATCACTGCGACTATTGCGACAAGCACATACAGGACACGCCTACAGCTCGTAAACGACATCTTCAAGGTATCCAGCACCTCCGTGCTAAAGCACTCTGGTACGATTCCCTCAAATTTCAAGATCCTAGTCAGGTTTATCCAGATGGGTTTGTCAAAGGGGTCTGCAATCGCTTCGTCAAAACGTACGGTGATTCTTGCAAGTATGCCCATCCAAGAAACTTGTCCAGTGCCAGCCTTCAAGGGGTACTAATTGATAATATGCAGCCAGCAACATTAACGATGGCGACTAATTTGGTAGGCGGAGGCTCTACACCAGGGAATGTTGTGCAAGACAACATGGGAATGACATGGGGTAATTTACCTCCATCTTTGAAGCCTCCTCCTGAGGGTGGATATTCAGCCCTTCCCTTTGTGGACTGGGGATAG 555 0.4613 MHILADAVCNSRAFVYFNYDLLYEIEDLEGLIKERINRMPLGKYHCDYCDKHIQDTPTARKRHLQGIQHLRAKALWYDSLKFQDPSQVYPDGFVKGVCNRFVKTYGDSCKYAHPRNLSSASLQGVLIDNMQPATLTMATNLVGGGSTPGNVVQDNMGMTWGNLPPSLKPPPEGGYSALPFVDWG 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0236 184 SUPERFAMILY beta-beta-alpha zinc fingers 42 81 IPR036236 -
Lele05g0236 184 Gene3D Classic Zinc Finger 41 91 - -
Lele05g0236 184 Pfam U1 zinc finger 43 75 IPR013085 GO:0008270
Lele05g0236 184 PANTHER NUCLEASE-RELATED 39 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0236 Lele-ChrLele05 1314272 1316230 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Lele05g0236 zf-U1 9.3e-11 CL0361