Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0231 ATGGCGAGTGGTCTCATTCCATTTCTGGCGATGGCTTTTGTGCAGCTGGGGTACGCGAGCATGAATATCATTTCAAAGCTTGCAATGCAATCTGGCATGAACCCCGTCGTCCTTGCCCCTTATCGCCAAATCTTCGCCACTCGCGTCTCTCGCCATCGATCCCTTCGCTTTCTGCTTCGAACCCAAAACGGTCCCCAAGTTGACCAAGTCCATTATGTTCCAGATATTGATTTCTTCCTTAACTGGACAAGACTACCTGAAAATAAGGGGGTGGAGTGGGCAAGCAAAGATGATAGGGACTGTATTGGCGTTCTTTGCACAGGAGTAGCGTATGGCCTCATGTCGTGGACTATTGAGAGGAAAGCTCGTTCTTGCCTTCACAGGCTCTGCTCTCGTTGTATTTGGATCTGCATTCAAATCAGTGATCGTGTCATCTCTCTCCGTCGGAAAGAAGAGATGGGGCTGTCTTTCGGTAAGCTATTTAGCCGGCTCTTTGCCAAGAAAGAGATGCGTATTCTGATGGTAGGTCTCGACGCTGCTGGTAAGACTACCATCTTATACAAGCTCAAGCTGGGAGAGATCGTGACCACCATTCCTACCATTGGGTTTAATGTAGAGACTGTGGAATATAAAAATATTAGCTTCACCGTCTGGGATGTGGGTGGCCAGGACAAGATCCGTCCTTTATGGAGACACTATTTCCAAAACACACAAGGGCTTATCTTTGTTGTTGATAGCAACGATCGTGATCGTGTTGTTGAGGCCAGAGATGAACTTCACCGGATGTTGAACGAGGACGAGTTGAGAGATGCTGTACTTCTTGTATTTGCCAACAAGCAAGATCTACCAAATGCTATGAATGCTGCTGAAATCACGGACAAGCTTGGTCTTCATTCTCTCCGTCAGCGTCACTGGTACATCCAGAGCACGTGTGCCACTTCTGGGGAAGGACTCTATGAGGGACTGGACTGGCTCTCCAACAATATAGCCAACAAGGCTTAA 1002 0.478 MASGLIPFLAMAFVQLGYASMNIISKLAMQSGMNPVVLAPYRQIFATRVSRHRSLRFLLRTQNGPQVDQVHYVPDIDFFLNWTRLPENKGVEWASKDDRDCIGVLCTGVAYGLMSWTIERKARSCLHRLCSRCIWICIQISDRVISLRRKEEMGLSFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0231 333 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 166 331 IPR027417 -
Lele05g0231 333 CDD Arf1_5_like 170 328 IPR045872 GO:0003924
Lele05g0231 333 PANTHER ADP RIBOSYLATION FACTOR-RELATED 154 328 IPR024156 GO:0005525
Lele05g0231 333 SMART rab_sub_5 170 332 - -
Lele05g0231 333 SMART arf_sub_2 153 333 - -
Lele05g0231 333 ProSiteProfiles small GTPase Arf family profile. 163 329 - -
Lele05g0231 333 SMART sar_sub_1 153 329 IPR006689 GO:0003924|GO:0005525
Lele05g0231 333 TIGRFAM small_GTP: small GTP-binding protein domain 168 304 IPR005225 GO:0005525
Lele05g0231 333 FunFam ADP-ribosylation factor 1 153 333 - -
Lele05g0231 333 Gene3D - 157 333 IPR027417 -
Lele05g0231 333 Pfam ADP-ribosylation factor family 159 329 IPR006689 GO:0003924|GO:0005525
Lele05g0231 333 PRINTS GTP-binding SAR1 protein signature 271 292 IPR006689 GO:0003924|GO:0005525
Lele05g0231 333 PRINTS GTP-binding SAR1 protein signature 199 223 IPR006689 GO:0003924|GO:0005525
Lele05g0231 333 PRINTS GTP-binding SAR1 protein signature 171 194 IPR006689 GO:0003924|GO:0005525
Lele05g0231 333 PRINTS GTP-binding SAR1 protein signature 226 251 IPR006689 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0231 Lele-ChrLele05 1292239 1298012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0231 3 68 Nodulin-like Gene Family AT1G09380 48.485 2.16e-13 68.6