Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0229 ATGTCCGACAACAAGGATTGCACGGACCAATATGGCGTCCTCCTGTACTATAAGTATACTCAAATTCCTAACCTCGACCACCTCCTCACTTTCTACGAGTCTAATTGCTCATCCCTTGGCCTCCTTGGTCGCGTTCGTCTCTCCTCCCACGGCGTCAATGTCACTGTAGGTGGCAAGTTATCCTCCCTAGAAAGACACATAGAAATAGTCAAGGCTGATAGATTATTTGAAGGGACTGATTTCAAGCTTGCTGCTTGTCATCAACCATTAAACGACAAGATTGCAAAAGAATGCGGATTCACTTCTCTTTCAGTTCGAATTGTCAAGGAGCTGGTTACTCTTAGTTCTCATCCCTTGCTAAAACCACCAGAAATTTCAAACGCTGGAAGACATCTCTCTGCAGTTGAGTTTCATTCTGTCCTACAGAATGCTGCCAAGGAGAGTCCAGCAGATGGCCTTGTCTTACTTGATGCAAGAAATCTTTATGAGACAAGAATTGGGAAATTTCAAGCACCGAATGTTCAAACTTTGGATCCACAAGTTAGACAATACAGTGATTTGCCTTCATGGGTAGATGGTAATCATGATCAATTGAAAGGGAAGCAAATCCTCATGTATTGCACTGGCGGAATCAGATGCGAAATGGCATCAGCATATATTAAGTCAAAAGGTTTGGGCTTTGAGAATGTGTTTCAGCTATTTGGTGGGATACAACGATACTTGGAGCAATTTCCAGATGGTGGTTTCTTTAAAGGAAAGAATTTTGTTTTTGATCATCGAATATCTGTTGGGAGCTCAGATGCAAAGGTTATTGGTACTTGCCTTCCTTGTGGGTGTTCGTTTGATGATTATTCTTCACGGAGCAGATTCCTTCCAAACCCATCCAATATCTGCTTTAGTCTCCATCACCCCACCCCCACCCCCGGGTTTTTGCTTCTGAAGGCTGTTATTGTGGTCCACCAGAATGAAGCTGCACCCTATGTTTGTGAGTTGTGCCAACAAGAGGGCAAGGCTGCAACGATGATGCAGCTAACTGAAATTGGTGAAGCAGAAACACCACTGCCAAATATTGAGTTCCAAAACGTTCCATTGGATACTATTTCATCTCATATGCATCAGAAAGATGGTAAGCAATGTTCTGTGGTAGAAATAAGTTACCACACTAGCGGTTGTTTAACGTTTGATGTCAGGTTGGCAAGAAAACTTAGAATCTTGTGCTTGCATGGATTTCGGCAGAATGCATCAGGTTTTAAAGGAAGAACAGCATCATTAGCCAAAAAAGTCAAGAAAATTACCGACTTATTTTTTATAGACGCGCCTCATGAGTTGCCATATATTTATCAACCCCCAGTGTCGGATCAGCATACAAATTGTGCATTAACTTCATTGCCCCCAAGTCCACCTCCACCTTCGGGGAATTGTAAGAAGAAATTTGCATGGTTTGTGCCACCCAACTTTGACAGTGGAAGTAGAGCTGATTGGAAGGTAGGCGATAGCCCATTTGATCCTCTTCAATACCAGCAGCAAACAGATGGATATGATATTTCACTAGCTCATTTGAAGGCTGTGTTTGCTCAAGAAGGGCCATTTGATGGGATAATGGGATTTTCACAGGGAGCAGCAATGGCTGCATTAATCTCTGCACAACAAGAGAAGCTTAAAGGTGAAATGGACTTCAGATTTGTAATATTGTGCTCAGGCTTTGTTGTCCATAGGAAGGAGATGGACTGCGAGTTGATCAAATGCCCTTCTCTTCACGTTTATGGCAACGAACACGGTAATGACCGGCAGATAGCCAACCAAGTCAGCAAGGAACTTGCTTCCCTGTATGATGGAAGTAGCTCGCTTACTGTTGAACATGACTGTGGTCATATAATTCCTACGCGTTCTCCGTACATTAATGTGATCAAGGACTTCCTAAATCGTTTTCTGCAATAG 1938 0.4288 MSDNKDCTDQYGVLLYYKYTQIPNLDHLLTFYESNCSSLGLLGRVRLSSHGVNVTVGGKLSSLERHIEIVKADRLFEGTDFKLAACHQPLNDKIAKECGFTSLSVRIVKELVTLSSHPLLKPPEISNAGRHLSAVEFHSVLQNAAKESPADGLVLLDARNLYETRIGKFQAPNVQTLDPQVRQYSDLPSWVDGNHDQLKGKQILMYCTGGIRCEMASAYIKSKGLGFENVFQLFGGIQRYLEQFPDGGFFKGKNFVFDHRISVGSSDAKVIGTCLPCGCSFDDYSSRSRFLPNPSNICFSLHHPTPTPGFLLLKAVIVVHQNEAAPYVCELCQQEGKAATMMQLTEIGEAETPLPNIEFQNVPLDTISSHMHQKDGKQCSVVEISYHTSGCLTFDVRLARKLRILCLHGFRQNASGFKGRTASLAKKVKKITDLFFIDAPHELPYIYQPPVSDQHTNCALTSLPPSPPPPSGNCKKKFAWFVPPNFDSGSRADWKVGDSPFDPLQYQQQTDGYDISLAHLKAVFAQEGPFDGIMGFSQGAAMAALISAQQEKLKGEMDFRFVILCSGFVVHRKEMDCELIKCPSLHVYGNEHGNDRQIANQVSKELASLYDGSSSLTVEHDCGHIIPTRSPYINVIKDFLNRFLQ 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0229 645 Gene3D alpha/beta hydrolase 398 645 IPR029058 -
Lele05g0229 645 Pfam Serine hydrolase (FSH1) 400 634 IPR005645 -
Lele05g0229 645 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 106 263 IPR036873 -
Lele05g0229 645 SMART rhod_4 139 246 IPR001763 -
Lele05g0229 645 Gene3D - 121 274 IPR036873 -
Lele05g0229 645 FunFam esterase OVCA2 isoform X6 398 645 - -
Lele05g0229 645 ProSiteProfiles Rhodanese domain profile. 149 249 IPR001763 -
Lele05g0229 645 SUPERFAMILY alpha/beta-Hydrolases 404 644 IPR029058 -
Lele05g0229 645 CDD RHOD_YceA 129 242 - -
Lele05g0229 645 Pfam UPF0176 acylphosphatase like domain 12 110 IPR040503 -
Lele05g0229 645 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 5 643 IPR020936 -
Lele05g0229 645 FunFam Rhodanese-like domain-containing protein 6 2 112 - -
Lele05g0229 645 FunFam Thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 2 119 277 - -
Lele05g0229 645 Gene3D - 1 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0229 Lele-ChrLele05 1280767 1284864 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0229 9 644 Sulfurtransferasese or Rhodanese AT1G09280 57.009 0.0 712