Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0227 ATGGCGTCTTTGCAGCCCGACTTAGATCCTGTTCATTCCGATTCGTTGTCCCGATCCTGTCTTAAAGAGAGCACCGATTTTGGGTCCGATTCTAACCAACACAATTCTCTCCACCCCTTTCGATGGAGATCCGACACTGAGCGTCGGATCTACTCCTTCAAGCTCGTCGATGCTCTGCGCCACGTCCTCCGTCGCAGTCCTTCTCTCCCAGCCAAACCCAGCGGCGGTCGTGAAATTCGTGAAACGGCGGATAGAGTTCTAGCCGCGACGGCCAAGGGCAGAACTAGATGGAGTCGAGCGATTCTGGCTTCTCCGCTCGGCCGTTGGAGATTTCAGAGGCAACACAAGAAGGTGAAGAAGATGACAAGAGGACTGAAGAAACCGGAGATTAGGAAAGAGGGAAGGAGGTTACCGGCTCTGCATAAGAAAGCGCGCGTTCTCGGCCGATTAGTTCCTGGTTGCCGTAAGGTCTCCTTTCCGAATCTTCTGGAAGAAGCCACTGATTATATATCGGCCTTGGAGATGCAAGTTCGAGCCATGACGGCACTCACCGAATTGTTCGCCGGTGGTGGCGCGCCGGCCGATCGACAGGAGGGGCCTCGACTGTAA 609 0.5468 MASLQPDLDPVHSDSLSRSCLKESTDFGSDSNQHNSLHPFRWRSDTERRIYSFKLVDALRHVLRRSPSLPAKPSGGREIRETADRVLAATAKGRTRWSRAILASPLGRWRFQRQHKKVKKMTRGLKKPEIRKEGRRLPALHKKARVLGRLVPGCRKVSFPNLLEEATDYISALEMQVRAMTALTELFAGGGAPADRQEGPRL 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0227 202 CDD bHLH_AtIBH1_like 131 184 IPR044549 GO:0006355
Lele05g0227 202 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 124 173 IPR011598 GO:0046983
Lele05g0227 202 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 43 187 IPR044660 GO:0006355
Lele05g0227 202 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 130 187 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0227 Lele-ChrLele05 1270686 1271294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0227 21 180 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 47.337 5.18e-40 134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0227 05 1270686 1271294 Lele13g2211 13 28502072 28502680 CCT
Lele05g0227 05 1270686 1271294 Lele14g2149 14 26889353 26891456 CCT
Lele05g0227 05 1270686 1271294 Lele15g0200 15 1173717 1174325 CCT
Lele05g0227 05 1270686 1271294 Lele16g0209 16 1179154 1179756 CCT
Lele05g0227 05 1270686 1271294 Lele06g0038 06 284710 285297 ECH
Lele05g0227 05 1270686 1271294 Lele05g0227 05 1270686 1271294 ECH
Lele05g0227 05 1270686 1271294 Lele07g0233 07 1290358 1290963 hybridization
Lele05g0227 05 1270686 1271294 Lele08g0038 08 260834 264558 hybridization