Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0224 ATGAAACTACTTCGTCAACTGATTTTCCCTCTGTTTGGGTTCATAATCATTCGATCTTTCTGTGTTGGTAATAGTGCGGCAGGCGATTGTGGTGGGAGGCAAATTGCTTACACAATTACAGTTGGTCAATCAAACGGTCGGTTCAAAACAGTTCAAGCAGCCATTGATTCCATAAGCACCAACAATGCTCGCTGGGTTAAAATTCACATATATCCAGGCAAATATACAGAGCAGGTGCAGGTCCCTTACGAGAAGCCATGTGTCTTCTTGGAAGGGGAAGGCAGAGCCGTTACGACAATAACGTACAATGGCCACCAACAAACAGATACCAGCGCCACATTCTCCTCCATTCCTAACAACGTCGTTGCCGCCGGCATCAACTTCGAGAACTCTTGGGATCTATCAACAGCGTCGGATTTGGATGACAACACAGGAGGAGACCAATTGGTACAGCCAGCACTGGCGGCGAGAATATACGGGGACAAGTCTGCGTTCATCGATTGTGGATTCTTGGGTTTTCAAGACACGCTTTGGGATGTACAAGGTCGTCATTACTTTAAGAATTGTTATCTCGAGGGCGCAGTAGACTTCATTTTTGGCAACGGCCAGTCCTATTACGAGAATTGTTATGTGAATGCGTCGTTGAGCACGTCAAGGGCACATGCGGATTTGGGTTTTATAACAGCACAAGGGCGAGAGGCAAGGGAGGAGGCAAGTGGGTTTGTATTCAAAGGAGGAAGGGTGGTTGGGAGTGGTCCGGTTATGTTAGGAAGAGCCTATGGACCATACTCCAGAGTCATATTTCACGAAACGTATTTGGATTCAGTAGTTTCTCCTCAAGGATGGGATGCTTGGAGCCACGAAAAATTTGGCGTACGCGGAAGTCAACTGTACAGGGTCGGGGGCGAGTTTGAAGAAGCGCGTGAGGTGGGAGACGAAACTCTCTGCGTCGCAGCTGAAGCAGTTTTCGTTATCCTCCTTCATAAACCGAGATCGGTGGCTTGCCAATTTACCTTACCCGGTCTTGTTGGTTTAATTTTCAGGGCCTTCTGGATAATTGAAACTGCCACAGTGCATTTGCGTTCTCTTTCTTTCAAATTTTCCATCTTATCGTCTCCGCCAACTTCTCAAATTCGCCACCGCTATCCTTCCACCCGATCGTTGAATCTCAGTTGGCATTCTGTCTCGCGCAAGCACGTGTTACTTGTCAGGTTTGAGAATTTTAGTTCCAGATGTTCAATAACGGATACTGATATATGCTTAGACTCTGTCTCAACGGATGCCGTACCGGGAGAATGCTCAACTGTCGAAATTGATTGTCTGGTTTTGTCAGAAGAGGAACAACAAGCCCTTGCAGCCACTCCAGCCCACCCATATGGATTATATGAGGCTCTTAATCTTAAGCTTGTGTTTTCAGCTTTCTATTCTAGCTGCATAGCTAGAAATTTAGTGGAACAACTATGGAATTTTGCTTGGCCTTCAACCATTGCATTGATCCATCCAAGCCTTTTACCTGTTGTGGTCATGGGTTTCTTCACCAAACGTGCTACAATTGTTGGAGGTCCAATGGTTGGCAAAGTTATGGATCATGTGCCCAGAGCATCTGCTCAGTTGCTATTTGGGATTATGATCATTCATGCCCATTATGTTCGTCCTACTTCAGTGTCTTCCCTGCTTTTATATCCTTGGTTTCTCATACTAATGTCCGCGGGGGCTATTGAGAGGCTATGTGGTGTAGCTTTAGGGGTTGCAAATGAGCGAGACTGGGTGGTACTGTTAGCAGGAGTTAATAGGCCAATCGCACTTGCAGAGGCAAATGCTGTTCTGAATCAAATTGATCTCTTGTGTGAGACTCAAGATGTTGATTTACAGATAGTTGGGGCATCGCTATTTGGAGTCCTTCTTTCTATATTTCATCCAGTGACCTGTTTGAAAATTGCTGCTGGCTTAATGATGGGACTGTTGCCCGCTACCATTGCTCTCGCACGATTGGCCAACAAGCTCTCATCAGGTGTTCTTGACAGGCCTAGATCTTCACAAACCTATTACAAAAGGTCCACTGAAGAACCTGAGCCACGCCATGACAACATAGGAAGTCTTGCTTGTGTGCTCCTTTACTTCAATGTTGTCCTTACTCCTGGCAATTTGATGACAGCATTTTTAGCACAGCCAGGCCCACACCCATCTGTCATTGGAGGATTTAGTGGATTATGTGCATTGATGGTTATTGCTGCTACATTTGTTTCTTCAACACTGGTCAAGCAATTTGGTCTTTGGAACCCCTCCTCCAAAGCGGGGGACCCCTCCTCCAAAGCAAATCTCATTGGGACAACAGAGGTTGCCGTTGCTAGTTTTGCAGAGTGCGCAATGCTGAGAGTTGCAATAATTGCAAATGATGTTTAA 2403 0.4594 MKLLRQLIFPLFGFIIIRSFCVGNSAAGDCGGRQIAYTITVGQSNGRFKTVQAAIDSISTNNARWVKIHIYPGKYTEQVQVPYEKPCVFLEGEGRAVTTITYNGHQQTDTSATFSSIPNNVVAAGINFENSWDLSTASDLDDNTGGDQLVQPALAARIYGDKSAFIDCGFLGFQDTLWDVQGRHYFKNCYLEGAVDFIFGNGQSYYENCYVNASLSTSRAHADLGFITAQGREAREEASGFVFKGGRVVGSGPVMLGRAYGPYSRVIFHETYLDSVVSPQGWDAWSHEKFGVRGSQLYRVGGEFEEAREVGDETLCVAAEAVFVILLHKPRSVACQFTLPGLVGLIFRAFWIIETATVHLRSLSFKFSILSSPPTSQIRHRYPSTRSLNLSWHSVSRKHVLLVRFENFSSRCSITDTDICLDSVSTDAVPGECSTVEIDCLVLSEEEQQALAATPAHPYGLYEALNLKLVFSAFYSSCIARNLVEQLWNFAWPSTIALIHPSLLPVVVMGFFTKRATIVGGPMVGKVMDHVPRASAQLLFGIMIIHAHYVRPTSVSSLLLYPWFLILMSAGAIERLCGVALGVANERDWVVLLAGVNRPIALAEANAVLNQIDLLCETQDVDLQIVGASLFGVLLSIFHPVTCLKIAAGLMMGLLPATIALARLANKLSSGVLDRPRSSQTYYKRSTEEPEPRHDNIGSLACVLLYFNVVLTPGNLMTAFLAQPGPHPSVIGGFSGLCALMVIAATFVSSTLVKQFGLWNPSSKAGDPSSKANLIGTTEVAVASFAECAMLRVAIIANDV 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0224 800 Pfam Pectinesterase 43 288 IPR000070 GO:0030599|GO:0042545
Lele05g0224 800 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 37 289 - -
Lele05g0224 800 Pfam Ferroportin1 (FPN1) 699 758 IPR009716 GO:0005381|GO:0016020|GO:0034755
Lele05g0224 800 Pfam Ferroportin1 (FPN1) 473 684 IPR009716 GO:0005381|GO:0016020|GO:0034755
Lele05g0224 800 Gene3D - 32 307 IPR012334 -
Lele05g0224 800 SUPERFAMILY Pectin lyase-like 35 288 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0224 Lele-ChrLele05 1244031 1250663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0224 15 288 Carbohydrate Esterase AT2G19150 43.273 6.03e-68 224