Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0221 ATGGTGAGCCAGGAAGATTTGTTGATCGCTAAGATCTGTGAGCTCTACGATAAGATCTCCAGCCTCGAAAGTCTCAAACCCTGCCAAAATGTCGACACTCTTTTTACCCAACTCGTTCTCACATGCATACCACCCAACCCTATCGATGTCACTAAGCTCCCCACAAGCCTTCAACAGATTCGTTCCAAACTCATTCTTCTCTGTGGCCAAGCCGAAGGCCTCTTAGAGAGCCATTACTCCACCATACTCGGCTCCTTCGACAACCCCCTCCACCACCTCGACATCTTCCCTTATTACTCCAACTACCTTAAACTTGGTCTTCTCGAGTTCACCATCCTCACTCAGCACTGCACTCGTGTGCCTTCCAACATAGCCTTCGTCGGCTCTGGCCCTCTCCCTTTCACTTCGATTGTCTTGGCCTCCAATCACCTCCCCACCACCACCTTCCATAATTATGACATCGACCCACTGGCCAATTCCATGGCGGTTCGCTTGTTTTCTTCTGATAATGATTTGTCCAAACGCATGGTTTTTCATACCAGCGACATCTTGGACGTGACCAATGACTTGGAAGAGTACGAGGTTGTTTACTTGGCGGCTCTCGTGGGGATGGACAGTGACGAGAAGAATCGGGTGATCGATCATTTGGCTAAGTATATGGCTCCGGGAGCAGTTCTGATGCTGAGGAGTGCCCATGGAGCTCGTGCTTTTCTGTACCCTGTGGTTGAGCCTGACGATCTTCGAGGCTTTGAGGTTCTCTCTGTGTTTCATCCGACCGACGAGGTTATCAATTCTGTTGTCATAGCACGAAAGTATCCCCTGCCTTTACAACACTCGCATGATCAGCAAGCTGGTCTTCCAAATATGATATTGCCCAACAAGTGTTCTGAGATACAAGCGTTTAATCCCCTCGTCAAACACGGGAATATGATTGAGGAGTTGGCCCTTGAGGAACAGCTATCGTAA 966 0.4907 MVSQEDLLIAKICELYDKISSLESLKPCQNVDTLFTQLVLTCIPPNPIDVTKLPTSLQQIRSKLILLCGQAEGLLESHYSTILGSFDNPLHHLDIFPYYSNYLKLGLLEFTILTQHCTRVPSNIAFVGSGPLPFTSIVLASNHLPTTTFHNYDIDPLANSMAVRLFSSDNDLSKRMVFHTSDILDVTNDLEEYEVVYLAALVGMDSDEKNRVIDHLAKYMAPGAVLMLRSAHGARAFLYPVVEPDDLRGFEVLSVFHPTDEVINSVVIARKYPLPLQHSHDQQAGLPNMILPNKCSEIQAFNPLVKHGNMIEELALEEQLS 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0221 321 PANTHER NICOTIANAMINE SYNTHASE 3 4 315 IPR004298 GO:0030410|GO:0030418
Lele05g0221 321 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 276 IPR004298 GO:0030410|GO:0030418
Lele05g0221 321 Gene3D Vaccinia Virus protein VP39 7 273 IPR029063 -
Lele05g0221 321 Pfam Nicotianamine synthase protein 4 272 IPR004298 GO:0030410|GO:0030418
Lele05g0221 321 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 134 259 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0221 Lele-ChrLele05 1218872 1219837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0221 4 321 Nicotianamine Synthase Gene Family AT1G56430 61.043 3.60e-134 382
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0221 05 1218872 1219837 Lele05g0221 05 1218872 1219837 ECH
Lele05g0221 05 1218872 1219837 Lele07g0224 07 1227316 1232645 hybridization
Lele05g0221 05 1218872 1219837 Lele08g0033 08 191615 192760 hybridization