Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0211 ATGGCGATTCAAGACGACCTGCGATCAGTGTACAAGAAACATCACCCCCCACGTTTGGATGATGACGTTTGGCGTTTGGAGAAGATAGCCAAAGATGGACCAATTTACCGGCGACTATGTGATCATGGAATAAGGACGGTTAGGGATCTTGTGCGGTCTTACAACATTGACCCATCTTCATTGCTTGAGAAAGTTGGCAAAAATCGTGGGAAGTGTTGGGAGAAAATTACTGAACATGCAAAGGATTGTGTTATGGATGATTACAACCTTTACATGTATTACACAGAAGAACAACGAGTAGGTCTGCTTTTCAATTGTATTTACATCCTCGTAGGAGTGACGTTTGATGGCCAAAACTACTATTCTCCTGATACTCTTGCCCCTGCTGAGAAGCATGTGGTGGAAGTGGTGAAGCAACATGCTTACAAAAATCTGAATGATTTGAAACCAGTTGGTGATCAGACATGTGTTAACTTTCAGAGGTCACTTACATATCCACAAGCTGGGCAGGCTAGTGGTCCAGATCAAGGTCAAATTGAAACATGGGCAGGCATTGGCAAGTATTTTGTGCACGGTGAGACACATATAAAGAGTTTAGTCACTTCATAA 609 0.4269 MAIQDDLRSVYKKHHPPRLDDDVWRLEKIAKDGPIYRRLCDHGIRTVRDLVRSYNIDPSSLLEKVGKNRGKCWEKITEHAKDCVMDDYNLYMYYTEEQRVGLLFNCIYILVGVTFDGQNYYSPDTLAPAEKHVVEVVKQHAYKNLNDLKPVGDQTCVNFQRSLTYPQAGQASGPDQGQIETWAGIGKYFVHGETHIKSLVTS 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0211 202 Pfam Calmodulin binding protein central domain 19 83 IPR046830 -
Lele05g0211 202 Pfam Calmodulin binding protein C-terminal domain 90 150 IPR046829 -
Lele05g0211 202 PANTHER OS02G0177800 PROTEIN 8 157 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0211 Lele-ChrLele05 1154785 1158704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0211 11 202 Calmodulin-binding Proteins AT5G26920 38.144 6.42e-33 120
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0211 05 1154785 1158704 Lele08g0020 08 123948 126926 hybridization