Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele05g0210 | ATGGAGCTTGTAGTCTCGTTTAACGAGAGGAAACAAGCCGTTACCCGCCTTTATCAGCTGGCGCCAGGTTTGAAAGGATGGTTCGGAGCCGAAGCTAGAGGCTTAGAAAACCCAGAGTTAATTGAGGATGATGGGATACGGTTTGAACGTTCTGAGGGGCGGATGGCTATTTTGGTAATTATGGAGCGAGACCTGCAGGAGGTCGCAGGGATGCGGACGCCATTTGAACGTTCTCACAACTATAGCTCAATCTTTTTCCCTTCCAAAGATTCCCCCTTCAACTCTATATTGTATCAGATGGTAAGGGGGGGAGAACTTGGTGGCAAACGCAATTTCAGAAAAAGGGTTCGGTCAAAGGAAGGGGGCTCTGATGATTCGGATGAGGACTATGTGGTTCCAGACGAAGGTAGAGATTTGTCTGATTGTTCGGAGGATTCATTGTCTTCTTTAGATGGATGTGCATCCGAGGAGAGTTTTGGTAGCTTTGTAGAGGATGAGGAGGAGGAAATTGAAGTAAGGAGGAAATTCAATAGATCCAAGTCAAAAAATGGCATTTGTGGTCGGCGGAAAATTGGCAGGAAACCCTCACACCAGAGAGGAAGGATAGCTTATTCACATCAACTAGAAGAAGATAAGGAAGAAGAACTAGAACGAGAGGAAGAAGAAGAAGAACGAGAACAAGAAGAGGAAGATTATGAAGGTACAGATGAATATGAGGAATATGATGCCAATGAAGATTTTGATTGTGATGAGGATGAGGAATTTACAGCCGAGGAAGAAGATTACTCAGATGAGGAAGAAATAAAGGGGAGACAGAAGGAAAGTAATGGCATAAAAATGGGCAAGAAGGTTGCGCAGAAGCGGGCCTCTGTAACTTATACTAGAGGTCGTAAAAGAAGAAAGAATTCTAGAGCCGCAAGGAAGCCCTCGAGAAAGAAGAGAAGAAAGAATGGAGGGTTGAACTTGAGGAGGAAAGCAAATTATGATGATGAGGGTGATTTTTTAGATAACAGTCCTACCATCAGAACCAAGAGTAAGAAAAAACCAGGACGAAAAAGGAGAAGACTAATCGTTGATTCAGATTCGTACTCAGATTGTGTGTCATCTAGATCATCTGATTATGGGTATACCATCTCTGAAGAAGAGAGAGAACAGGTGAGAGAAGCTGAGGAATTGTGTGGATGTTTGAGAATTAATTTGGGGAGTTCATCCCTTTTGACAAAAAATGAAGAGGATGGAGTCCATGAAGATCTACATCAGCAAAGAAAGCCTCCAGCCCGCAAAGGTAAGGAAAAGATAGAGGAACATCAGGGGAGAAAGGGCAAGGACAAGGTAGCGGATTTAAAAAGTAAGCCAGGAAAGCAAGTGTGTGGAATTTGTCTCTCTGAAGAAGATAAAAGAAGAGTAAGAGGAGTACTAGATTGTTGCACACACTTTTTTTGTTTTGCTTGCATTATGGAATGGGCAAAAGTGGAATCTCGCTGCCCTTTGTGCAAGCAGAGATTTAAAACAATTAGTAAGCCTGCACGATCAACAACAGCGGGGGTTGATTTGAGAGGATCAGTTATACAAGTCCCTGAACGTGATCAGGTTTATCAGCCCTCTGAAGAAGAACTCAGGAGCTATATTGATCCATATGAATATGTAATTTGTTCAGAGTGCTGTCAAGGTGGAGATGATGACCTCATGTTACTGTGTGATCTCTGTGACTCTCCTGCACACACATATTGTGTTGGTCTGGGTCGGGAGGTACCTGAAGGCAATTGGTATTGTGATGGTTGTAGGCCAGTTGCTTTGGGATCTTCAAGTTCTCAAGTTCAGGAAGGAGTGGCTGATTCAAGGGCAACAACAGTTCAGAGCCTACCTGGTAGACCATCCCCTGCTGTACGTGCAAGAGAAATTATTGACCTCAACTTGGTGTCCTCACCGCGTGCAGCTTTTAGTCAAGGGTTGGGGAATTTTTCTTCTAGATTTTCTGGTAGAAGTGTTGAAGGAGCTTCTCCAGTGTCTGGAGGAGGGGCACCAACTTTATCCGAGAGACGTTGGATACACCGTCAAATTCAACAATTACTTTCAATGGATAGAATGACTTCTGCTGCTGGTCGATCTAATGGCATTTCAGCTACCAATTCAACTAGTAACCTATATGGCTCTCAAAATGATCAAAGTAGGGTAACAACCGCTCAAGACACAAGGACACAGAATGTGGGAACATCGTCATATCACTCATTTTTTGAGGAAAGATTATGCAACAGTTCCTCCACACTAATGCAGAATGGGGATAATTTCTCTATGAGAATAAGCAATTCAAGAATGCCAGCAGTTCAAGATTCAGCTCCATTTACCAACAGAGCTGTGAATGGGGCATTTTGGCCTGGTCTTGTGGGGACGCCTCCTGTATCAGATTATGAACAAGTCCATCAGCTTAGGAGCAGTTCGCACATTGTTGCTGATGGTACCATGTCCCCTGCTATTAGAGAAGAGAGTAACTTTCACATAGTAAAGGAACAATTGTCATCACTGGTTAAACGCCATCTTATGGGCTTGTCACAAAATATTGATTTAGGCAACAGTACCTTCAAGGACATTGCCAGGATTTCTCTGAACACCATACTAGCAGCTTGTGGTCTTGAGCACAAGAAGAGCGAGGTTTGCGCTGTGCCCCCTCCTTCAGCCTGTCCCCACATTGAACTGATGGCTGGTGGGCAAACGAGTCTGATTAAAGGTTGCTGCTCATCTTGCTTTGATTCTTTTGTAGGAGACGTGGTTAAGAGGACCATGGACACAAGAATGTCGCAGTGGTTGCGACTAGGCCTTTAG | 2820 | 0.4394 | MELVVSFNERKQAVTRLYQLAPGLKGWFGAEARGLENPELIEDDGIRFERSEGRMAILVIMERDLQEVAGMRTPFERSHNYSSIFFPSKDSPFNSILYQMVRGGELGGKRNFRKRVRSKEGGSDDSDEDYVVPDEGRDLSDCSEDSLSSLDGCASEESFGSFVEDEEEEIEVRRKFNRSKSKNGICGRRKIGRKPSHQRGRIAYSHQLEEDKEEELEREEEEEEREQEEEDYEGTDEYEEYDANEDFDCDEDEEFTAEEEDYSDEEEIKGRQKESNGIKMGKKVAQKRASVTYTRGRKRRKNSRAARKPSRKKRRKNGGLNLRRKANYDDEGDFLDNSPTIRTKSKKKPGRKRRRLIVDSDSYSDCVSSRSSDYGYTISEEEREQVREAEELCGCLRINLGSSSLLTKNEEDGVHEDLHQQRKPPARKGKEKIEEHQGRKGKDKVADLKSKPGKQVCGICLSEEDKRRVRGVLDCCTHFFCFACIMEWAKVESRCPLCKQRFKTISKPARSTTAGVDLRGSVIQVPERDQVYQPSEEELRSYIDPYEYVICSECCQGGDDDLMLLCDLCDSPAHTYCVGLGREVPEGNWYCDGCRPVALGSSSSQVQEGVADSRATTVQSLPGRPSPAVRAREIIDLNLVSSPRAAFSQGLGNFSSRFSGRSVEGASPVSGGGAPTLSERRWIHRQIQQLLSMDRMTSAAGRSNGISATNSTSNLYGSQNDQSRVTTAQDTRTQNVGTSSYHSFFEERLCNSSSTLMQNGDNFSMRISNSRMPAVQDSAPFTNRAVNGAFWPGLVGTPPVSDYEQVHQLRSSSHIVADGTMSPAIREESNFHIVKEQLSSLVKRHLMGLSQNIDLGNSTFKDIARISLNTILAACGLEHKKSEVCAVPPPSACPHIELMAGGQTSLIKGCCSSCFDSFVGDVVKRTMDTRMSQWLRLGL | 939 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele05g0210 | 939 | PANTHER | F18C1.6 PROTEIN | 100 | 930 | - | - | |
Lele05g0210 | 939 | MobiDBLite | consensus disorder prediction | 322 | 343 | - | - | |
Lele05g0210 | 939 | Pfam | Ring finger domain | 456 | 499 | IPR001841 | - | |
Lele05g0210 | 939 | SUPERFAMILY | FYVE/PHD zinc finger | 520 | 596 | IPR011011 | - | |
Lele05g0210 | 939 | MobiDBLite | consensus disorder prediction | 266 | 281 | - | - | |
Lele05g0210 | 939 | MobiDBLite | consensus disorder prediction | 112 | 153 | - | - | |
Lele05g0210 | 939 | ProSitePatterns | Zinc finger RING-type signature. | 476 | 485 | IPR017907 | - | |
Lele05g0210 | 939 | MobiDBLite | consensus disorder prediction | 112 | 126 | - | - | |
Lele05g0210 | 939 | ProSiteProfiles | Zinc finger RING-type profile. | 457 | 499 | IPR001841 | - | |
Lele05g0210 | 939 | MobiDBLite | consensus disorder prediction | 292 | 321 | - | - | |
Lele05g0210 | 939 | SMART | PHD_3 | 550 | 595 | IPR001965 | - | |
Lele05g0210 | 939 | Coils | Coil | 204 | 238 | - | - | |
Lele05g0210 | 939 | MobiDBLite | consensus disorder prediction | 213 | 265 | - | - | |
Lele05g0210 | 939 | SMART | ring_2 | 457 | 498 | IPR001841 | - | |
Lele05g0210 | 939 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 527 | 600 | IPR013083 | - | |
Lele05g0210 | 939 | MobiDBLite | consensus disorder prediction | 180 | 372 | - | - | |
Lele05g0210 | 939 | ProSiteProfiles | Zinc finger PHD-type profile. | 548 | 597 | IPR019787 | - | |
Lele05g0210 | 939 | SUPERFAMILY | RING/U-box | 456 | 505 | - | - | |
Lele05g0210 | 939 | MobiDBLite | consensus disorder prediction | 698 | 734 | - | - | |
Lele05g0210 | 939 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 434 | 517 | IPR013083 | - | |
Lele05g0210 | 939 | CDD | RING-HC_Topors | 457 | 499 | - | - | |
Lele05g0210 | 939 | MobiDBLite | consensus disorder prediction | 414 | 446 | - | - | |
Lele05g0210 | 939 | MobiDBLite | consensus disorder prediction | 180 | 200 | - | - | |
Lele05g0210 | 939 | Pfam | PHD-finger | 551 | 596 | IPR019787 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele05g0210 | Lele-ChrLele05 | 1134655 | 1142737 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele05g0210 | 545 | 594 | C2H2 Transcription Factor Family | AT3G01460 | 48.077 | 5.56e-09 | 58.5 |