Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0208 ATGGGGCTCGACGGTAACGGGTGCTCGTCGGAGACGGTGGAGAAGGGTTCTTGGGCATTTGATCTGAGCTTAGCCCCTGGAAATGATTATAGAATTGGAGGCTTAACATGTATGACCAAGATGAGTAAGACGGAATTACCAAGGACGAAGGCGCCACTTGTTCCTCTGGCAACTTTGATTGGCCGTGAGCTTCGAAATGAAAAAGTTGAAAAACCTTTTGTGAGGTATGGACAGGCTGGCTTGGCAAAGAAAGGGGAGGATTACTTTTTAATCAAGACAGACTGCCAGAGGATTCCTGGGGATTCATCAACATTGTTTTCTGTTTTTGCGATCTTTGACGGGCACAATGGTATATCCGCTGCTATTTTTGCAAAGGAAAATTTACTTAATCATGTTATGAGTGCAATTCCACAAGATATCAGCAGAGATGAGTGGCTTCAAGCTCTTCCTCGGGCTCTAGTTGTTGGGTTTGTGAAAACTGACATAGAATTTCAGAAAAAAGGCGAGACTTCTGGGACTACAGCAACATTTGTTCTGGTTGATGGTTGGACTGTCACTGTTGCATCTGTTGGGGATTCCCGATGTATATTAGATACCCAGGGAGGTGTAGTATCTCTTCTGACAGTTGATCACAGACTGGAAGAGAATGCAGAAGAGAGGGAACGTGTTACTGCTAGTGGCGGTGAAGTAGGAAGACTCAATGTATTTGGAGGCAACGAGGTAGGACCCCTTCGCTGCTGGCCTGGTGGATTGTGTCTTTCTAGATCGATTGGTGACACAGATGTAGGAGAATTTATTGTGCCAATTCCACATGTTAAGCAAGTGAAGCTTTCAAATGCTGGTGGAAGGCTTATAATAGCTTCTGATGGCATATGGGATGCTTTATCTTCTGATATGGCCGCCAAATCTTGTCGGGGTCTACCTGCAGAGCTTGCTGCAAAGCTGGTAGTTAAGGAGGCTTTAAGGTCAAGGGGACTGAAGGATGATACAACCTGCCTTGTTGTAGACATTATTCCTTCAGACCATCCTGTATTACCACCAATTCCAAAAAAGAAACATAATGTGATAACTTCGCTTCTCTTTGGAAACTCCACAAACAAAGCTAATAATAAGCTTTCTGCTGTGGGAGTTGTAGAGGAGTTATTTGAAGAGGGTTCTGCAATGCTTGCAGAAAGGCTTGGTAAGGATTTTCCTTTTGATGCGAGCTCCGGAATTTTCCGTTGTGCAGTCTGCCAGGTGGATCAACCTCCTGGCGATGGTTTATCAGTGAACTCTGGACCTTTTTTCTCGCCAGCATCAAAGCCATGGGAAGGCCCATTCCTCTGTGCTAACTGTAGAAGGAAGAAAGATGCCATGGAAGGAAAAAGGCCTAGCAGATCCACAGTGACAGCATAG 1395 0.4509 MGLDGNGCSSETVEKGSWAFDLSLAPGNDYRIGGLTCMTKMSKTELPRTKAPLVPLATLIGRELRNEKVEKPFVRYGQAGLAKKGEDYFLIKTDCQRIPGDSSTLFSVFAIFDGHNGISAAIFAKENLLNHVMSAIPQDISRDEWLQALPRALVVGFVKTDIEFQKKGETSGTTATFVLVDGWTVTVASVGDSRCILDTQGGVVSLLTVDHRLEENAEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKLSNAGGRLIIASDGIWDALSSDMAAKSCRGLPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSDHPVLPPIPKKKHNVITSLLFGNSTNKANNKLSAVGVVEELFEEGSAMLAERLGKDFPFDASSGIFRCAVCQVDQPPGDGLSVNSGPFFSPASKPWEGPFLCANCRRKKDAMEGKRPSRSTVTA 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0208 464 Pfam Protein phosphatase 2C 103 320 IPR001932 -
Lele05g0208 464 SMART PP2C_SIG_2 90 337 IPR001932 -
Lele05g0208 464 PANTHER PROTEIN PHOSPHATASE 86 336 - -
Lele05g0208 464 Gene3D - 73 341 IPR036457 -
Lele05g0208 464 SUPERFAMILY PP2C-like 78 337 IPR036457 -
Lele05g0208 464 FunFam probable protein phosphatase 2C 5 75 342 - -
Lele05g0208 464 SMART PP2C_4 65 335 IPR001932 -
Lele05g0208 464 ProSiteProfiles PPM-type phosphatase domain profile. 68 337 IPR001932 -
Lele05g0208 464 CDD PP2Cc 83 337 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0208 Lele-ChrLele05 1119358 1122847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0208 41 463 PP2C-type Phosphatase Gene Family AT1G09160 77.049 0.0 665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0208 05 1119358 1122847 Lele05g0208 05 1119358 1122847 ECH
Lele05g0208 05 1119358 1122847 Lele07g0211 07 1134042 1137665 hybridization
Lele05g0208 05 1119358 1122847 Lele08g0017 08 90033 92018 hybridization