Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0191 ATGATTTTCAACAAATTCCGTTCTGTTGCAGGTGATATACATGGGCAGTACCGAGACTTACTAAGGCTTTTTGAATATGGTGGCTACCCTCCTGATGCAAACTACCTGTTCCTAGGGGATTATGTAGATAGAGGAAAGCAAAGCTTGGAGACAATATGTTTGCTTTTGGCCTACAAAGTAAGATATCCTGACAAAGTTTACCTGTTGAGAGGAAACCACGAAGATGCAAAGATAAATCGGGTATATGGATTCTATGATGAATGTAAAAGGAGGTTCAATGTGAGGCTGTGGAAGTTATTTACTGAGTGCTTCAACTGCTTGCCAGTAGCTGCACTAATCGATGACAAAATTCTCTGTATGCACGGTGGCCTCTCTCCAGAATTGAAAAACTTGAATCAGATAAGGGAAATTTCAAGGCCTACCGATGTTCCTGATAATGGTCTGCTTTGTGATCTGCTTTGGTCTGATCCTGATTCTAACATTGAGGGCTGGGCAGAGAGTGACCGAGGCGTCTCAAGTAATTTTGGTGCTGATGTAGTTACTCAGTTTATGGATCAAAATGACTTGGATCTCATTTGCCGAGGTCATGAGCCTGCCAAAGCTGGAAAGTCCGCTTGGGTTCAGAACTTCTATAGAATCGAACATCTCTCTAAGTGGTCACTTTTAGTTTGGCAAAGGAGAGGCTTCCCCAGCTTTATGTGTTGA 705 0.4255 MIFNKFRSVAGDIHGQYRDLLRLFEYGGYPPDANYLFLGDYVDRGKQSLETICLLLAYKVRYPDKVYLLRGNHEDAKINRVYGFYDECKRRFNVRLWKLFTECFNCLPVAALIDDKILCMHGGLSPELKNLNQIREISRPTDVPDNGLLCDLLWSDPDSNIEGWAESDRGVSSNFGADVVTQFMDQNDLDLICRGHEPAKAGKSAWVQNFYRIEHLSKWSLLVWQRRGFPSFMC 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0191 234 SUPERFAMILY Metallo-dependent phosphatases 9 208 IPR029052 -
Lele05g0191 234 Pfam Calcineurin-like phosphoesterase 9 198 IPR004843 GO:0016787
Lele05g0191 234 ProSitePatterns Serine/threonine specific protein phosphatases signature. 69 74 IPR006186 GO:0016787
Lele05g0191 234 FunFam Serine/threonine-protein phosphatase 3 210 - -
Lele05g0191 234 Gene3D - 8 218 IPR029052 -
Lele05g0191 234 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 9 205 - -
Lele05g0191 234 SMART pp2a_7 2 228 IPR006186 GO:0016787
Lele05g0191 234 PRINTS Serine/threonine phosphatase family signature 35 62 IPR006186 GO:0016787
Lele05g0191 234 PRINTS Serine/threonine phosphatase family signature 68 92 IPR006186 GO:0016787
Lele05g0191 234 PRINTS Serine/threonine phosphatase family signature 131 158 IPR006186 GO:0016787
Lele05g0191 234 PRINTS Serine/threonine phosphatase family signature 102 128 IPR006186 GO:0016787
Lele05g0191 234 PRINTS Serine/threonine phosphatase family signature 6 33 IPR006186 GO:0016787
Lele05g0191 234 PRINTS Serine/threonine phosphatase family signature 188 208 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0191 Lele-ChrLele05 1041418 1042579 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0191 9 194 Calmodulin-binding Proteins AT5G63870 32.579 1.77e-29 110