Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0188 ATGGCATCTCCTAGAACCTTCCACTACACTGCCTCTGCTGTTCATAAGGCTGGACTTAGTCATCGTCTCATGGAAAGAATCCTTCTACCCTCCGCGCGCTTGGCTAATTCCTTTGCTACAAAGACGACTGCCGATGAAACTCTGCTTCGAGTGGAGGAAGTGCCAAATAATTTTCCATTTACAATTGAAGACAATCCTGGTGAGAGAACCATACTCCTTAAGAGACAATATGAAGATGAGACCATCACAATTCAAGTTGACATCCCTAATGTAGCAGCTGAAGATGAGGATGAGGGTAATGATGAGGAGGAGAATCATGATGAATCTAGCATTCCTTTAGTTGTAAATATTTCCAAAAGTAATGGGGTCACTCTGGAGTTGGGTGTTTCAGCAGCTGTATTCAATGTTTCCAGTGCGAGATTTTTTTTGTCGGACAATTTCAGTGTCGGAAATCAAGCAAACTCTGCTATAGTAAAGGAGATTGGGGTAGTGGGAGAAGACAAGGAGCTGAAGGAGAAGAGTAAGGAGTTGAGTTGGCAGCACACAGTGGCAATTTTTAATAGTTTTACGTACTTGAAGTATTTGACAAAGAAATATTTAAAGAAGCATAATGTGAGGGACTGGCTCAGAGTGATTGCTGCGAACAAAGATAGAAGTGTTTATGAGCTAAGATTCTCAATACTTGTAGTCTTGATGCATGATTGGTTCTTCCCAAACGGAGCCCAGCCTCTAACTGTTCTTTCCATCCATTTGCAAGACACCAATTCCAAGCTTCTCCAAGTCACTGTCACTTCACTGACAATTGTTCATCTAGTTTGGGAGCAGGGCCTTCCATTCTTGTCTCCTCCACGCACACTTCAATTTCCAACACTTCCTTGGGCAAATGAGCTTCCTTCTATGCAACGCTATAAAAGGAGACAGCATCACGTAGCAGAGTCCCCCACTTCCTTAGGCATACTCCTTCTCTGCCTCCATCATCCTCACGCCATCTCTGACATATCTTCTCTAATTGCCTTCGTAACACTCATTCCTGCAGAGACCAATTTAAGGCCAAGTGAAAACTTGGTCATCGCGGGGGAACGAGGACAGAGCTGGGAAGACGAAACAGCTAACGTTGTTTATATAATTACCGACCAAATAGCTGAGATAGACAACAAGAACAAGGCAGGGAAATCATGTTGGAGAAGGGGAGCACGTGCATCTTCTCATGAACTCCAGCTTAGAGCTGGCTTCTACAGATATGTTGCACGTGCCCTGCTTCTCCAACATGATCTACCGTCCTGCGTGGCCACACTTGAGAGTGTTTTGAGATTTAGCCAGAGAAGCTCGGCCTCTAGTATATATACGCAGTGTGGAGTTATAAAGGAGAAGAGCGGGCACTTAAAGAGTCCTCTGAGCGTGTATTTTGTGGATAGTGTAGAGCACGTTCTTGGGGGAGAGTGGGAGCTGGCACTTGGGGAACTGATAGATAGGACTCTGAAATGGACACACCCCTCCAGTGAATCTTATTCTTGA 1515 0.4469 MASPRTFHYTASAVHKAGLSHRLMERILLPSARLANSFATKTTADETLLRVEEVPNNFPFTIEDNPGERTILLKRQYEDETITIQVDIPNVAAEDEDEGNDEEENHDESSIPLVVNISKSNGVTLELGVSAAVFNVSSARFFLSDNFSVGNQANSAIVKEIGVVGEDKELKEKSKELSWQHTVAIFNSFTYLKYLTKKYLKKHNVRDWLRVIAANKDRSVYELRFSILVVLMHDWFFPNGAQPLTVLSIHLQDTNSKLLQVTVTSLTIVHLVWEQGLPFLSPPRTLQFPTLPWANELPSMQRYKRRQHHVAESPTSLGILLLCLHHPHAISDISSLIAFVTLIPAETNLRPSENLVIAGERGQSWEDETANVVYIITDQIAEIDNKNKAGKSCWRRGARASSHELQLRAGFYRYVARALLLQHDLPSCVATLESVLRFSQRSSASSIYTQCGVIKEKSGHLKSPLSVYFVDSVEHVLGGEWELALGELIDRTLKWTHPSSESYS 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0188 504 SUPERFAMILY Mitochondrial glycoprotein MAM33-like 51 131 IPR036561 -
Lele05g0188 504 MobiDBLite consensus disorder prediction 91 105 - -
Lele05g0188 504 Pfam Ribosomal L22e protein family 129 225 IPR002671 GO:0003735|GO:0005840|GO:0006412
Lele05g0188 504 MobiDBLite consensus disorder prediction 89 109 - -
Lele05g0188 504 PANTHER 60S RIBOSOMAL PROTEIN L22 188 225 IPR002671 GO:0003735|GO:0005840|GO:0006412
Lele05g0188 504 Gene3D Mitochondrial glycoprotein 36 183 IPR036561 -
Lele05g0188 504 Pfam Mitochondrial glycoprotein 46 183 IPR003428 GO:0005759
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0188 Lele-ChrLele05 1020231 1028667 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0188 119 225 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 45.614 3.83e-09 53.1