Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0166 ATGTATATCTATATTTCCTGTTTTCAGGCTGCAGATAAGGAAGCATTAAATCTCCTAAAGTGGCTTGCAACTTCTCAAGCTGCAGAGGATATCAATTCTGATGATGAGCTTATTCGTGAAACCATTTTGAGTCCCTTGTTACCTGCTACAACAATTGATAAGGTGCTGGAGAAAGCTAATATGGATTACGAGAGTGAGTCCCAAAAGGAGTGTCAAGATATTCTTGAGTCCATTGATGATCAACTTCAGTTGGAGTCATCAAAGAGAAAGCCGCCTTTTTTCTCAAATTTTGATCATCCTGTTGAGTCTTCGTCAAACAACATGATTCCTCAAGTTGATGGTTCTGCTGATGATGAGTTTTCAAGTCCAAGTGCTGGTTTGGCTGGGATTTCAGTTGCACCGGATGAAAAAGGGGAATCCAAAAGGTCTTCCAATTACTGTATACTGCAAAATACCAGAACAAATACTTACAGCAAAGATAACAGGAATAAAGTTTGGGGCTCTTTGCCATTTTCAATGAGCCATGACAACTTTGAACATGCTAGCTTACATGTTGCCCATACATCTGAAAGGGAAACTGGAAAATCTGTTGACTCAGTTTATTTGGCCAGAAATGAGATAGAGAATAGTGGCATAACGAATGGGTATAAAGGTGCTTCAGACTTAAAAGAAGTACACACACTAGATAACTGTTCTGTGCGGGACTTGATGAGGAGAAAGAGATGTTGTCGAGTTGAGCAAATTGACCGTGAATCTGAAATAACTAGAAGATTGTTTTTGGATGGGGATGAGAAGCTTAAAACTGATGAAGGAGAAACAGAAGTCCAGAAGAGCCGTGTTCTAAAAATGAGCAATAATGATTTAGTGTGTGGGAAATCACCCCTTGTAGTTGGCAGTTATACTGGACCGAGTCTCTGTGAGCTGAAGAAGTTTGACTCTACTAGTTCTCCCCATTACCTAGAGGTTTCCAGTTATAAAAAGTTTAAGATTGACTCAACATATGTACAAACTGACAACTGTCAACGAATTGACGTTGCAGCCTTAGGAAGCTTACAATCTATTGGGAATTTAGGGTCTGGAAGAGATAATTGCATGTATGAATGTTCTTATGGAAGCAAATCTTATGAGCAACATGATCAGATGAAGTCATGTGAGAATGCTGAGGGTGCGAATACAGCAACTGACATTCAAGTATTGCACTGTGTAAAAAGTGATGAGAAAAAACCTAGAGAGAATTTGGGCTTTTGTGACACTATTGGCATAGAACCCTTTGTCAATGACATGATGGGTAATCAAATGAGATCAACCTCTGGCAGGAGAGTTGCCACGGCAGTGAAAGCTCTGGATGATGTTATTCCTGCTTCTGCCGGGGGTTCCCTGAATGAGATGGAAACTTGGAACAAGCATGTTGCTGATAATGCCCCTGGGCATAAAGGGGAAAGGGTCTTGGGTGTTGCAACTTACTATCAAAATGATGGCGCTCATCTACGCTTATTGAAACCCAAAATTTTGCCTCCTTCTGAGGGTAGTGTTCAGAGATGGCTACTTTGTGATGAGAGAGAGCAAATGTTTCCAGAAACTGATGCAAAGGAGAAACGTTTGCCTGAATGGAGTACAAGACCCTGTCTTATGTCTAAACATGTCCAAGACGTTGATTCTGAAAAGAAGACTCCATGTATCGGTGGTGGACAAATGAATCTAAGTAAAACATGCTTGGACGGCTCGCAAGATACTTCTCAGATATCAGGCCCTGATGTAAAATCAAAGTCTACTCCTCTAAGTCAAATTGGATTTCGTGATCCTGCAAGTACTGGCTGTGGACAGCAATTGACACTACTCAGTATAGAGGTTCTTGCAGAATCAAGAGGAGAACTTTTACCTGATCCCCAGTTTGATGCCATCAACGTTGTAGCGCTTGGTTTTCAAAATGATAGTGGCGCTATTGTTGATGATCTTGTTCTTTTGCATTGTAAACTAGAATCTTGTCATAGAAATTTTGGGGGTCTATCAGGCTGCAAAGTGTTGGTCTTCACGGATGAAAAACACTTGCTAAAAAAATTTATTAAGATTGTGTCTTCATCTGATCCAGATATTCTGATGGGTTGGGATATTCAAGGCGGTTCTCTTGGTTTTTTAGCAGAAAGGGCTACACATCATGGATTAGGATTACTTAATAGTTTATCTCGTACTCCATCTGACACTTGGATTACTTGTGATGATACTGAAACTTCTGAAAAAGATATGTCAGAAACTGCCATTCCTGATATATCTAGTGCAGATGATGTACAAGAAAGTTCTATAATTGAGGATGAATGGGGACGAACACATGCCAGTGGAGTTCATGTTGGTGGCAGAATTGTGCTTAATGTGTGGCGACTTATCCGTGGAGAAGTTAAGCTCAATTTATACTCCGTGGAAGCTGTAGCTGAAGCTGTATTGAGGAGGAAAGTTCCTTCAATTCACAACAAGGTTCTCACCAAATGGTTTTCTGGTGGTCCTGGACGAGCAAGATACCGGTGTGTCAAATATATTACTGAGAGAGCAAAGCTGAATCTTGAGATATTAAGCCAACTTGATATGGTAAATCGAACATCAGAACTTGCTCGTATTTTTGGTATAGATTTTTTTTCTGTTCTCTCCAGAGGTTCACAATATCGTGTTGAATCAATGTTTCTGAGGTTGGCACATACACAGAATTATCTTGCCATCTCTCCTGGGAATCATCAGGTTGCTTCTCAACCTGCCATGGAGTGCCTGCCCCTTGTGATGGAACCAGAGTCAGGATTTTATTCAGATCCGGTTATTGTATTTGACTTTCAGTCATTATATCCATCCATGATAATTGCATACAACCTTTGCTTTTGTACGTGCCTTGGCAAAGTTGTGGCATCAAAAGCAAACACGCTTGGGGTTAGTTCATTTTCACCAGAGCAGCATGTTTTGCAGGATTTAAAAGATCGGATCTTGCTTACTCCAAATGGTGTTATGTTTGTTCCTTCCAAGGTTCGTCGAGGTATACTACCACGCTTGTTGGAAGAAATTTTATCAACTAGGATAATGGTGAAACAAGCAATGAAAAAGTTGGGTCCTTCACAGCAAGTCCTTCAGCGGATATTTAATGCTAGGCAGCTTGCTTTGAAGCTTATATCAAATGTGACATATGGCTACACTGCTGCTGGATTTAGTGGTCGTATGCCTTGCGCAGAGCTTGCAGACAGTATTGTTCAATGCGGCCGTTGCACACTGGAGAGGGCTATATCATTTGTAAATCAACACGATAAGTGGAATGCAAAAGTCATTTATGGAGATACCGATAGCATGTTTGTTCTCCTCAAAGGACGCACTATTAAAGAATGCTTCCAAATTGGGAGTGAGATTGCTTCTGCTGTCACTGCTATGAACCCTAGTCCTGTCACCCTGAAGCTGGAGAAAGTTTATCAGCCTTGTTTCCTCCTTACTAAGAAGCGGTATGTTGGTTACAGTTATGAAAGCCCTGATCAAGTTGAGCCAGTTTTTGATGCTAAAGGTATTGAGACAGTTCGTAGAGATACATGCGGTGCAGTTGCAAAGACAATGGAACTGTCTTTGAGGCTCTTTTTTGAAAATCAGGATTTATCAGAGGTGAGAAGTTATTTACAACGTCAGTGGAAGAGAATTCTTTCGGGCAAAGTCTCCCTTAAAGATTTTGTCTTTGCTAAGGAGGTTCGCCTAGGTAGCTATAGTGCAAGGACATCATCATCTTTACCTCCAGCTGCAATTGTTGCCACCAAGGCAATGAGGTTTGACCCTAGGGCAGAACCACGCTATGCTGAGAGAGTACCTTATGTTGTAATCCATGGAGAGCCTGGGGCCCGCCTGGTTGACATGGTTGTGGATCCATTGGAAGTTTTGGCACTTGATTCCCCATTCAGAATAAATGACTTGTATTACATTAATAAACAAGTAATACCTGCTTTGCAGCGAGTGTTTGGGCTTGTCGGTGCTGACCTGAACCAATGGTTCGTAGAGATGCCCCGTCCTTTAAAGGAAGACCGGGTAAAGCATCTCATTGCTCCAAATTCACATCGAACAAGAATTGACTCGTATTATCTGTCAAAGCATTGTATACTGTGTGGCGGATTGGTTCAGCCATCTGCACATATATGCATTAAGTGTTCTGAAAATGGAGTGGCTGCTACAACGGCCGTGACTAGTAAAACATCAAAGTTGGAACAAGAGATGCAGCATCTTGTTGCTATATGTGACCATTGTGGAGGTGGAGACAGGCTTCTGGAAAGTGATGTAAAGTGTACGTCAATTTCATGCTCGGTGTTTTTTGAGAGACGAAAAGTTCAGAAAGAACTACTAGCTATGAACCACGTTGCTTCTGGCGAAGGCTTCTATCCGAAATGCATGGTCGAGTGGTTCTGA 4410 0.4147 MYIYISCFQAADKEALNLLKWLATSQAAEDINSDDELIRETILSPLLPATTIDKVLEKANMDYESESQKECQDILESIDDQLQLESSKRKPPFFSNFDHPVESSSNNMIPQVDGSADDEFSSPSAGLAGISVAPDEKGESKRSSNYCILQNTRTNTYSKDNRNKVWGSLPFSMSHDNFEHASLHVAHTSERETGKSVDSVYLARNEIENSGITNGYKGASDLKEVHTLDNCSVRDLMRRKRCCRVEQIDRESEITRRLFLDGDEKLKTDEGETEVQKSRVLKMSNNDLVCGKSPLVVGSYTGPSLCELKKFDSTSSPHYLEVSSYKKFKIDSTYVQTDNCQRIDVAALGSLQSIGNLGSGRDNCMYECSYGSKSYEQHDQMKSCENAEGANTATDIQVLHCVKSDEKKPRENLGFCDTIGIEPFVNDMMGNQMRSTSGRRVATAVKALDDVIPASAGGSLNEMETWNKHVADNAPGHKGERVLGVATYYQNDGAHLRLLKPKILPPSEGSVQRWLLCDEREQMFPETDAKEKRLPEWSTRPCLMSKHVQDVDSEKKTPCIGGGQMNLSKTCLDGSQDTSQISGPDVKSKSTPLSQIGFRDPASTGCGQQLTLLSIEVLAESRGELLPDPQFDAINVVALGFQNDSGAIVDDLVLLHCKLESCHRNFGGLSGCKVLVFTDEKHLLKKFIKIVSSSDPDILMGWDIQGGSLGFLAERATHHGLGLLNSLSRTPSDTWITCDDTETSEKDMSETAIPDISSADDVQESSIIEDEWGRTHASGVHVGGRIVLNVWRLIRGEVKLNLYSVEAVAEAVLRRKVPSIHNKVLTKWFSGGPGRARYRCVKYITERAKLNLEILSQLDMVNRTSELARIFGIDFFSVLSRGSQYRVESMFLRLAHTQNYLAISPGNHQVASQPAMECLPLVMEPESGFYSDPVIVFDFQSLYPSMIIAYNLCFCTCLGKVVASKANTLGVSSFSPEQHVLQDLKDRILLTPNGVMFVPSKVRRGILPRLLEEILSTRIMVKQAMKKLGPSQQVLQRIFNARQLALKLISNVTYGYTAAGFSGRMPCAELADSIVQCGRCTLERAISFVNQHDKWNAKVIYGDTDSMFVLLKGRTIKECFQIGSEIASAVTAMNPSPVTLKLEKVYQPCFLLTKKRYVGYSYESPDQVEPVFDAKGIETVRRDTCGAVAKTMELSLRLFFENQDLSEVRSYLQRQWKRILSGKVSLKDFVFAKEVRLGSYSARTSSSLPPAAIVATKAMRFDPRAEPRYAERVPYVVIHGEPGARLVDMVVDPLEVLALDSPFRINDLYYINKQVIPALQRVFGLVGADLNQWFVEMPRPLKEDRVKHLIAPNSHRTRIDSYYLSKHCILCGGLVQPSAHICIKCSENGVAATTAVTSKTSKLEQEMQHLVAICDHCGGGDRLLESDVKCTSISCSVFFERRKVQKELLAMNHVASGEGFYPKCMVEWF 1469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0166 1469 MobiDBLite consensus disorder prediction 573 593 - -
Lele05g0166 1469 MobiDBLite consensus disorder prediction 93 144 - -
Lele05g0166 1469 PANTHER DNA POLYMERASE ZETA CATALYTIC SUBUNIT 13 1461 IPR030559 GO:0006281|GO:0016035|GO:0019985
Lele05g0166 1469 Pfam DNA polymerase family B 875 1323 IPR006134 GO:0000166|GO:0003677
Lele05g0166 1469 Pfam C4-type zinc-finger of DNA polymerase delta 1368 1441 IPR025687 -
Lele05g0166 1469 FunFam DNA polymerase 1176 1345 - -
Lele05g0166 1469 Gene3D - 1176 1342 IPR042087 -
Lele05g0166 1469 Gene3D Palm domain of DNA polymerase 920 1165 IPR023211 -
Lele05g0166 1469 PRINTS DNA-directed DNA-polymerase family B signature 934 947 IPR006172 GO:0000166|GO:0003676|GO:0003887
Lele05g0166 1469 PRINTS DNA-directed DNA-polymerase family B signature 1043 1055 IPR006172 GO:0000166|GO:0003676|GO:0003887
Lele05g0166 1469 PRINTS DNA-directed DNA-polymerase family B signature 1099 1107 IPR006172 GO:0000166|GO:0003676|GO:0003887
Lele05g0166 1469 FunFam DNA polymerase zeta 1001 1060 - -
Lele05g0166 1469 ProSitePatterns DNA polymerase family B signature. 1101 1109 IPR017964 GO:0000166|GO:0003676
Lele05g0166 1469 CDD POLBc_zeta 882 1331 - -
Lele05g0166 1469 Gene3D Helix hairpin bin 1000 1060 - -
Lele05g0166 1469 CDD DNA_polB_zeta_exo 607 856 - -
Lele05g0166 1469 Pfam DNA polymerase family B, exonuclease domain 608 749 IPR006133 -
Lele05g0166 1469 SMART polmehr3 608 1113 IPR006172 GO:0000166|GO:0003676|GO:0003887
Lele05g0166 1469 Gene3D - 646 917 IPR036397 GO:0003676
Lele05g0166 1469 SUPERFAMILY Ribonuclease H-like 609 897 IPR012337 -
Lele05g0166 1469 MobiDBLite consensus disorder prediction 98 112 - -
Lele05g0166 1469 SUPERFAMILY DNA/RNA polymerases 921 1334 IPR043502 -
Lele05g0166 1469 FunFam DNA polymerase 617 917 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0166 Lele-ChrLele05 873322 893537 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0166 612 1448 Core DNA Replication Machinery Family AT5G63960 27.546 2.51e-83 296