Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0152 ATGAGAAACAAGAAGGTTTCTTCTGACAAAGTAAATTCAGAACAGCCCACACAGCTTTTTTCGTACGTCCCTATTTTAGGTTCGCTCCAAGAAAACATCATCAATCGTCCAGAACTAAAAACTCTGCTTTTGTTATCTCTTCTTCAAACCCTAATCCACTGTCCTGATATCGCATATCAGAGCATCTACTGTTGGAGAAGAATGGATCACCAAGGAGGGCATAGCGCAAACCCATCTATGGGGGCTGTTGGTAGTGGAGCTCAGTCGCCTTATGGTTCTAATCCTTACCAGCCAAGCCAAATATCCGGGGAACCCGGTTCTGTTGTTACATCGGTTGGGACCATTCAAACCACCGGTCAGCCTGCTGGAGCTCAGCTAGGGCAACATCAACTTGCTTATCAGCATATTCATCAGCAACAGCAGCAGCAACTTCAGCAACAACTCCAAACCTTTTGGGCAAATCAGTACCAAGACATTGAGAGAGTAAATGATTTCAAGAACCACAGCCTGCCCTTGGCAAGGATCAAGAAGATCATCAAAGCCGATGAGGATGTTAGGATGATATCAGCTGAGGCACCTGTTATATTTGCCAGGGCGTGCGAAATGTTCATATTAGAGTTGACCTTGCGTTCTTGGAACCACACCGAGGAAAACAAAAGGAGAACACTTCAAAAAAATGATATCGCAGCAGCAATCACAAGGACTGACATCTTTGATTTTCTGGTTGATATTCTGCCCCGGGAGGACTTGAAAGATGAAGTACTTGCATCAATCCCCACAGGAACCATGCCGGTTGCAGGGCCTGCTGATGCGCTTCCGTATGGCTATATGCCACCACAGCATGCTCCTCAAGTTGGCAGCGCTGCTGGGGTCATCATGGGTAGGCCTGTAATGGACCCGAGCATATATCCTCAACTATCTCATCCCTACATGTCACAACAAATATGGCCACGGCCACAAGAGCAGCAACAATCATCTCCAGATCATTAG 990 0.4657 MRNKKVSSDKVNSEQPTQLFSYVPILGSLQENIINRPELKTLLLLSLLQTLIHCPDIAYQSIYCWRRMDHQGGHSANPSMGAVGSGAQSPYGSNPYQPSQISGEPGSVVTSVGTIQTTGQPAGAQLGQHQLAYQHIHQQQQQQLQQQLQTFWANQYQDIERVNDFKNHSLPLARIKKIIKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDILPREDLKDEVLASIPTGTMPVAGPADALPYGYMPPQHAPQVGSAAGVIMGRPVMDPSIYPQLSHPYMSQQIWPRPQEQQQSSPDH 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0152 329 FunFam Nuclear transcription factor Y subunit gamma 134 247 - -
Lele05g0152 329 MobiDBLite consensus disorder prediction 81 109 - -
Lele05g0152 329 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 169 232 IPR003958 -
Lele05g0152 329 MobiDBLite consensus disorder prediction 76 109 - -
Lele05g0152 329 Gene3D Histone, subunit A 131 247 IPR009072 GO:0046982
Lele05g0152 329 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 130 270 - -
Lele05g0152 329 SUPERFAMILY Histone-fold 138 241 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0152 Lele-ChrLele05 805661 807547 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0152 85 316 CCAAT-HAP5 Transcription Factor Family AT1G08970 62.232 5.05e-83 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Lele05g0152 CBFD_NFYB_HMF 4.3e-17 CL0012