Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0145 ATGTCGCTCCCTACCGATCCCCATCTCCTTCTGGATTCTGCTCCCGTTCCTGCTCGTCCCAAGAGGCGCAGACCCAGAAGCCGAAAGAATCAGCAAGAAATTGAGAACCAGAGAATGACTCACATTGCCGGCGAGCGCAATCGAAGGAAGCAGATGAATGATCATCTCTCCGTTCTTCGTTCTTTGATGCCTGACTCCTACGTCCAAAGGGTACTTCGTTTGTATTTCATTTCTCGAATCAACTGGGGTTTGTTTAATTTGTGTTTTCATTACTGTTATAATATATTAACTGCATTGTTGGTGCATGTTGATCAGGCTTTCATAATTGGAGGAGCTATTAATTTCGTGAAGGAGCTCAAGCAGAGGCTGCAATTTCTGGGTTCTCAGAAACACACAGGGGACAAGGCAATCGAGCCCTTCTGCAAAGTCTTTGAGTTCTTCACATTCCCTCAGTACTCGATTACGAGTTCCACTGGGGCCACAATAATAATTCTGAACCTGTTGGAGACGGATCGGTGGGAGAGGCAATTCAATTGCGAACTGGGTTCAGTGGATGATATAGCCGCAGCTGTATTTCAAATGATGAACAGCATTCATTAG 600 0.455 MSLPTDPHLLLDSAPVPARPKRRRPRSRKNQQEIENQRMTHIAGERNRRKQMNDHLSVLRSLMPDSYVQRVLRLYFISRINWGLFNLCFHYCYNILTALLVHVDQAFIIGGAINFVKELKQRLQFLGSQKHTGDKAIEPFCKVFEFFTFPQYSITSSTGATIIILNLLETDRWERQFNCELGSVDDIAAAVFQMMNSIH 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0145 199 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 36 119 IPR011598 GO:0046983
Lele05g0145 199 Pfam Helix-loop-helix DNA-binding domain 37 64 IPR011598 GO:0046983
Lele05g0145 199 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 36 133 IPR036638 GO:0046983
Lele05g0145 199 MobiDBLite consensus disorder prediction 1 33 - -
Lele05g0145 199 Gene3D - 21 133 IPR036638 GO:0046983
Lele05g0145 199 PANTHER MAX DIMERIZATION, MAD 18 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0145 Lele-ChrLele05 768867 769738 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0145 19 130 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G24140 50.893 2.96e-25 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele05g0145 HLH 6.4e-07 No_clan