Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0139 ATGGCGCTGACATGTGACCATAATGTGGGTTGCTTATGGGACAATAATATGGCTTCCATCAACATAACAAAGACAGTGTCAGCGAATGATGCTTCTATAGTCAAACATAAAAAACGAAGCTTTCTGTTTCGTTCCTCCACTTCTGCCCAAGACTTGAGACATTTTGAACTGGAGAAAGAGAAAGAAGACGTTTCATCTCCTAGAGGAGTGTTAGAAGCCTGCATTCGCGATTTTGATTCTTCTCTTCAGTCATCCGAAATGGAGAACCGTTGTTCAAGGTCCAAGGCACAAATTAGTTGGAGCAAATATTTCAAAATTTTGAAAAAGAGGTCAATGAAGCGTCTAGCGTCCTTCCCTCCTCCTCTTGGTGCGCCAGAAATACCAAAAGGGAAAAGCAAAAGCAGTAGAGAAAATCCTATTTTGTGTAATGCATACAACTTCAAATCTTCGTTGACCAACTTCACACTCTCTGAATTGAGAAATGCAAGCAACAATTTTAGTAATGAAAATTTGATTGGAAGTGGTGGCTACTCTGAAGTTTACTGGGGTAGTCTCAAAGACGGGAGTCGAGTAGCTATCAAGAGATTGACTAAAGGGACTCCAGACGAGAGGACTGCTGGCTTTCTATCTGAGCTAGGCATTATTGCTCATGTTGACCATCCCAATATTGCAAAGCTTATTGGATGTGATGTAGGAGGAATGCACCTTGTCTTCCAACTTTCTCAGCTGGGAAGCTTAGGATCTCTCCTTCACGGTCCAAGTGAAAACAAGTTAGATTGGAGTAAAAGGTATAAGATTGCTCTAGGCATGGCCAATGGTCTCTTGTACCTTCATGAGAGTTGTCACAGGCGAATCATTCATAGGGATATTAAGTCAGATAATATCCTGCTCACTGAAACCTTTGAGCCACAGATCTGTGATTTTGGGCTGGCAAAATGGTTGCCCAGACAATGCACCCACCATAATGTATCGAAATTTGAAGGCACATTCGGGTATTTTGCTCCTGAATATTTCATGCATGGTATAGTGGACGAGAAAACTGATGTTTATTCTTTTGGGGTTATACTGTTGGAGCTTATAACTGGGCGTCCAGCTGTGGATCAAAATCAGCTTAGTGTAGTACTATGGGCAAAGCCTTTGCTTGATGATAATAATATTGAGGACCTTGTTGATCCTTGTCTTCGAGACGACTTTGACAAAAAACAGATGGACCGGGTTGTTTTGACTGCATCTCTGTGCATTGAGAACTCTCCTGTCTTACGTCCGTGCATGAGTCAGGCTGCAATACTGCTAAGGGATGATGACTATGTGAGGCAACCTACAAATACAAGCCGGAGGCGTTCTTTCCTTAGAACATACTCACAAGAGCTTCTGGATGTACAAGAATACAACTCAACCAAGTATCTAAATGATCTCAATCAACACAGGAAGATTGCCCTCGAATCTTGA 1449 0.4203 MALTCDHNVGCLWDNNMASINITKTVSANDASIVKHKKRSFLFRSSTSAQDLRHFELEKEKEDVSSPRGVLEACIRDFDSSLQSSEMENRCSRSKAQISWSKYFKILKKRSMKRLASFPPPLGAPEIPKGKSKSSRENPILCNAYNFKSSLTNFTLSELRNASNNFSNENLIGSGGYSEVYWGSLKDGSRVAIKRLTKGTPDERTAGFLSELGIIAHVDHPNIAKLIGCDVGGMHLVFQLSQLGSLGSLLHGPSENKLDWSKRYKIALGMANGLLYLHESCHRRIIHRDIKSDNILLTETFEPQICDFGLAKWLPRQCTHHNVSKFEGTFGYFAPEYFMHGIVDEKTDVYSFGVILLELITGRPAVDQNQLSVVLWAKPLLDDNNIEDLVDPCLRDDFDKKQMDRVVLTASLCIENSPVLRPCMSQAAILLRDDDYVRQPTNTSRRRSFLRTYSQELLDVQEYNSTKYLNDLNQHRKIALES 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0139 482 Gene3D Phosphorylase Kinase; domain 1 129 238 - -
Lele05g0139 482 ProSitePatterns Serine/Threonine protein kinases active-site signature. 285 297 IPR008271 GO:0004672|GO:0006468
Lele05g0139 482 Pfam Protein tyrosine and serine/threonine kinase 169 372 IPR001245 GO:0004672|GO:0006468
Lele05g0139 482 ProSitePatterns Protein kinases ATP-binding region signature. 172 194 IPR017441 GO:0005524
Lele05g0139 482 SUPERFAMILY Protein kinase-like (PK-like) 149 439 IPR011009 -
Lele05g0139 482 SMART serkin_6 166 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g0139 482 PANTHER OS08G0249100 PROTEIN 37 475 - -
Lele05g0139 482 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 242 445 - -
Lele05g0139 482 Gene3D Transferase(Phosphotransferase) domain 1 242 448 - -
Lele05g0139 482 ProSiteProfiles Protein kinase domain profile. 166 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0139 Lele-ChrLele05 738210 741411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0139 146 437 Receptor kinase-like Gene Family AT1G53420 39.604 1.69e-65 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lele05g0139 PK_Tyr_Ser-Thr 2e-39 CL0016