Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0123 ATGGGTGCACCTAAAAAAAGTGGGGTTAAGGCTTCAGAGGAGGCCGAGGAATTGGCTCGCGTCCCTTTGCAAGCAATCCTCTTGGCTGATAGTTTTACTACCAAGTTCAGACCTATCACCCTTGAACGTCCCAAAGTTCTATTACCACTCGTAAATGTTCCCATGATAAATTACACATTGGAGTGGCTTGAATCTGCTGGTGTCGAAGAGGTTTTTGTTTTCTGCTGTGCTCATGCTAAGCAAGTGACTTCCTATTTGAAGAAATCTGAGTGGCTCTCCCAACCAAATTTTACCGTCTCAATGATAGAGTCGCATCACTCCGTTAGTGCTGGAGATGCTTTGCGCCTGATATATGAGCGCAATGTGATACATGGAGATTTTGTCCTGATCAGTGGAGATACGGTAAGCAACATGTCTCTTACTCAGGCTCTTCAAGAGCACAAGGAAAGAAGAAAGAAAGATAACGATGCAATAATGACCATGGTAATTAAACGATCAAAACCTCATCCAGCGACTCATCAATCTCGACTTGGTACCGATGAACTTTTTATGGCCATTGATCCCGCTACCAAGCAACTTTTGTATTATGAGGATAAGGCAGACTATTCCAAAGGGATTCTACATCTCGATAAATCCCTGCTTCTTGATAATCCTTCCATCTCTCTGCACCATGACAAGCAGGATTGTTACATTGATATCTGCTCACCAGAGGTTCTTAGCCTATTTACAGACAATTTTGACTATCAACATCTACGGCGTCATTTTGTCAAGGGATTGCTTGTTGATGATATTATGGGATACAAGATATTTACTCATGAAATTCACTCAAGTTATGCTGCAAGGATTGATAATTTCCGCAGCTATGACACTGTCAGCAAGGATATAATTCATAGATGGACATATCCATTGGTGCCAGATGTGAAGTTTTTTGGCAATTCTGCTACTAAACTTGAACGACAGGGAATGTATCGTGCATCAGAAATATCGCAATCACATTCAGCAGGTGTTGGCCCATTTACTGTCATAGGATTTGGCACCAAAATTGGGGATAACACTACAATTTCAAATTCGGTTATTGGAGAAGGATGCACAATTGGCTCAAATGTTAAGATAGAGGGATCCTATATATGGGACAATGTGACCGTTCAAGATGGTTGTAAACTTACGCATGCCATTGTATGTGATGGGGTGACCATCAAGTCAGGAGCTGTTCTGGAACCTGGCGTGGTTTTATCTTTCAAGGTTGTAATTGGGCCTGAGTTTGCTGTTCCTTCATACTCAAAAGTATCTTTATTCCAGCAGCCAATTGAGGAAGATAGTGATGAAGAGCTGGAATATGCTGACAGTACTGGTGCAATGAATAGCTTAGTGGATAAGTATGGTGCAGAGGCTGCATTGCAGGTATTGGAGACACAATCCTCTTCTGCATCAGAGTTAGGTGTGGGTGGGGCTGGTTATGTTTGGTCAAAATGTGATGGAGGCCATGAAGAAGAATGGAGGCATTCAGTGGCTCCTATTCCCACAGATAAAATTTATGAGGCAATGAAAATTTTGGAAGAAGATCTGGATTTGGCTCATGATGGCAGTATTCTTCCACCTTCTGGAGAGCTGAAACCTGATTCTAATGAATCAGATATTGATGATTCCAGAGATGACTCATACTTTGAGAAAGAGGTTGAAGCAACTTTTCTCAGGGCTGTGCATGAGAACATAAAAGAAGACCATGTGGTTTTAGAAGTAAACTCTCTGAAGTTGTCATACGATAAGTTAGCAGCTGATTGTGCTGGAGCTATTTTCCATGCCATGATGAAATACGCTTTGGAGATCCCCCATAATTCAGCTGGTAGCTTGGTTCAGAACGTTGACAGTGTACTAACAACATGGAGAAAACTTCTAACGTCCTACCTTGCTGAAATTGATGAGCAGATAGAAGTGATACTGAAATTTGAAGAAATGTGCCTGGAATCTGCTAAAGAGTATGCTCCATTGTTCACTAAGATTTTGAGTATTATGTATGACAAAGATATCATACAAGAAGATGCCGTTTTAAGTTGGGAAGACGAGAAGAGAGAGGCAGACGAGACAGATAAAGTTTTTATTAAGCAGGCCCAGACATTTATTCAATGGTTACGAGAGGCTCCTGAAGAAGATGATGAAGAATAG 2163 0.4133 MGAPKKSGVKASEEAEELARVPLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLEWLESAGVEEVFVFCCAHAKQVTSYLKKSEWLSQPNFTVSMIESHHSVSAGDALRLIYERNVIHGDFVLISGDTVSNMSLTQALQEHKERRKKDNDAIMTMVIKRSKPHPATHQSRLGTDELFMAIDPATKQLLYYEDKADYSKGILHLDKSLLLDNPSISLHHDKQDCYIDICSPEVLSLFTDNFDYQHLRRHFVKGLLVDDIMGYKIFTHEIHSSYAARIDNFRSYDTVSKDIIHRWTYPLVPDVKFFGNSATKLERQGMYRASEISQSHSAGVGPFTVIGFGTKIGDNTTISNSVIGEGCTIGSNVKIEGSYIWDNVTVQDGCKLTHAIVCDGVTIKSGAVLEPGVVLSFKVVIGPEFAVPSYSKVSLFQQPIEEDSDEELEYADSTGAMNSLVDKYGAEAALQVLETQSSSASELGVGGAGYVWSKCDGGHEEEWRHSVAPIPTDKIYEAMKILEEDLDLAHDGSILPPSGELKPDSNESDIDDSRDDSYFEKEVEATFLRAVHENIKEDHVVLEVNSLKLSYDKLAADCAGAIFHAMMKYALEIPHNSAGSLVQNVDSVLTTWRKLLTSYLAEIDEQIEVILKFEEMCLESAKEYAPLFTKILSIMYDKDIIQEDAVLSWEDEKREADETDKVFIKQAQTFIQWLREAPEEDDEE 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0123 720 MobiDBLite consensus disorder prediction 528 550 - -
Lele05g0123 720 SMART 542_3 629 716 IPR003307 GO:0005515
Lele05g0123 720 CDD eIF-2B_epsilon_N 23 239 IPR035543 -
Lele05g0123 720 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 8 303 IPR029044 -
Lele05g0123 720 SUPERFAMILY Nucleotide-diphospho-sugar transferases 21 369 IPR029044 -
Lele05g0123 720 FunFam Translation initiation factor eIF-2B subunit epsilon 12 303 - -
Lele05g0123 720 Gene3D - 544 720 - -
Lele05g0123 720 FunFam Trimeric LpxA-like enzyme 316 449 - -
Lele05g0123 720 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 10 719 - -
Lele05g0123 720 SUPERFAMILY ARM repeat 555 713 IPR016024 -
Lele05g0123 720 FunFam Translation initiation factor eIF-2B epsilon subunit 545 720 - -
Lele05g0123 720 Pfam eIF4-gamma/eIF5/eIF2-epsilon 641 720 IPR003307 GO:0005515
Lele05g0123 720 Pfam Nucleotidyl transferase 25 165 IPR005835 GO:0009058|GO:0016779
Lele05g0123 720 CDD LbH_eIF2B_epsilon 341 419 - -
Lele05g0123 720 ProSiteProfiles W2 domain profile. 549 720 IPR003307 GO:0005515
Lele05g0123 720 Gene3D Hexapeptide repeat proteins 319 421 - -
Lele05g0123 720 SUPERFAMILY Trimeric LpxA-like enzymes 268 429 IPR011004 -
Lele05g0123 720 CDD W2_eIF2B_epsilon 555 718 IPR044123 GO:0005085|GO:0031369
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0123 Lele-ChrLele05 661932 674158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0123 1 713 Eukaryotic Initiation Factors Gene Family AT2G34970 65.193 0.0 953