Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0108 ATGGCATCCGATCAACACGACACCGTTTTCCCCGAAGTGGACCTTGACGACGATGACGACGAATCTCAAGAGGATGAAGACGACGACGACGACGACGACGTTCTTGGTGAACCCGAGGATGATGAAGATCGTGATGCTTCTCCTTCCACCTCTTCTGCCCTCGCCGTTACCGTCCCCGACCCTTCCTCCACCGTCACCGTTGCCGTCCTCGGTTCTGCTGTATCCAACGGCGCTCCTGCCCCAATTTCCACCTCTGCCGCTACCACAATTGTCGTTCCCGACAACGTCGATCCCAAGCGTCAGCGAATTGACTCCATCGAAGAGAAAAAGCCTCTGGACGATTCACGTAGACTTTTTCAACGCCTCTGGACCGATGAGGACGAGATCGAGCTCTTGCAGGGCTTCCTTGACTACACCGCACAGCGAGGATCCTCCCACCATAATGACACCGCTCTGTTTTACGACCAAATCAAGTCCAAGCTTCAGCTCGACTTCAACAAAAACCAGCTTGTTGAGAAGCTCCGAAGGTTGAAGAAGAAATACCGCAATGTTTTGAATAAGGTTAGCGCCGGCAAGGAATTGTCCTTCAAGAGCCCCCACGATCAAGCCACCTTCGAAATTTCTCGTAAGATCTGGAGCGATTTGGGCTCAACTGGCGCTGCTGCCGAAGATACCGCGTTGGATGACGACGAAATCAGCCCCAACCCTAACCTTAACCCTAATTTTAGCCACTCACAGTCGAAGAATGAGGTAATATTCGGGATTCCCGCGGAGAAGAGAACGCTATCGGCCCGGAAGCGTTCACGGTCTCGATCCGGGATCAGAACCGATGAGAAGCGCGACTTGAATGATGGATTGGCGGCAAATAAAGATAATTATTGTATTAGTAATAATAATGCTAATACTAATAATAATCATAACAATAACCATAACATACCAGTCTTGATTGAGGAGGCGGTGAGGAGTTGTTTGTCGCCCGTGTTCAAGGAGATAATGAGTAGTGCCATGGGTAACCCATTTGGGGCCAGGGGATTTGGAGGACTGGCATTAAATCCTATGCCATTGAGCTTCGGTGTGCCATCCTTGATGAATTGCGGCAGCGGAGAAACAGTAGATGAGAAGTGGAGGAAGCAACAAATTCTGGAGTTGGAGGTTTACTCGAAGCGGCTGGAGTTGGTGCAGGATCAGATCAAGGCTGCGTTGGAGGAGTTACGATCCACTGGACGATGA 1230 0.5049 MASDQHDTVFPEVDLDDDDDESQEDEDDDDDDDVLGEPEDDEDRDASPSTSSALAVTVPDPSSTVTVAVLGSAVSNGAPAPISTSAATTIVVPDNVDPKRQRIDSIEEKKPLDDSRRLFQRLWTDEDEIELLQGFLDYTAQRGSSHHNDTALFYDQIKSKLQLDFNKNQLVEKLRRLKKKYRNVLNKVSAGKELSFKSPHDQATFEISRKIWSDLGSTGAAAEDTALDDDEISPNPNLNPNFSHSQSKNEVIFGIPAEKRTLSARKRSRSRSGIRTDEKRDLNDGLAANKDNYCISNNNANTNNNHNNNHNIPVLIEEAVRSCLSPVFKEIMSSAMGNPFGARGFGGLALNPMPLSFGVPSLMNCGSGETVDEKWRKQQILELEVYSKRLELVQDQIKAALEELRSTGR 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0108 409 Coils Coil 167 187 - -
Lele05g0108 409 MobiDBLite consensus disorder prediction 1 60 - -
Lele05g0108 409 MobiDBLite consensus disorder prediction 227 246 - -
Lele05g0108 409 MobiDBLite consensus disorder prediction 11 44 - -
Lele05g0108 409 PANTHER BNAANNG10740D PROTEIN-RELATED 18 403 IPR007592 GO:0006355
Lele05g0108 409 MobiDBLite consensus disorder prediction 262 282 - -
Lele05g0108 409 MobiDBLite consensus disorder prediction 232 246 - -
Lele05g0108 409 Pfam Protein of unknown function, DUF573 119 213 IPR007592 GO:0006355
Lele05g0108 409 Coils Coil 383 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0108 Lele-ChrLele05 586149 587378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0108 1 406 GeBP Transcription Factor Family AT5G28040 46.309 2.71e-95 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Lele05g0108 DUF573 7e-35 CL0123