Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0099 ATGTTCGATGAAGTCCCAGACCACTTCCATCAATTTATAGTACCCAGAACCTCATCCCTCCCACTTCACTTATCTTTCCCTCTCAATGCCTCTCTAACACCTACTACTAATAATACCTTGCCTACCTTTGATCCTTATCATTATTTGCCTTTGCAACAACCCAATCTCTTGCACCACCCTCCTCCTCCTCCTCCTCCCCACAAACACCAACAAGACAGGCAAGATAATAGCACAACCAGAGTGCCCATGAACCTGGAGATTCAAAGACAAAGGCAATCACCTGACCTCATCGATTCCTGCTGGACTCACGATGAAGTGCTCGCGCTATTCAGGATCAGATCTGGCATGGAAACCTGGTTCCCAGACCTTACATGGGAACATGTCTCAAGGAAGCTAGCAGAGCTTGGATTTAAGAGGAGTGCGGAGAAATGCAAGGAGAAGTTTGAGGAGGAAAGTAGATACTTGAACCACATTAATTACATTGAAAATTATCGTTTTATTAGTGAGTTCGAACAAGAGCTTTACCAAGGTGAAGGCGATCACCAAAACCCTGAAGCTGAGGTTGGGACAGAAGAAAAGTCGACCCAGCAGCTGGAAAAGCCAAGGGAGGGACAAGACAAGACGTCGTGCCACGCTTTGGAAGAGGGTTCTACAAGACACGGCACATCAGCACCCATCATTACTAAACGCCGCGTGGTGGAAAAATCAAAGGACAGAAAGAGAAGGAAGCAAGGTGGTAAATTTGAGATGTTCAAGGGCTTTTGTGAGAACATTGTCAACAGGATGATGACTCAACAAGAGGAGATGCACAATAAGCTTCTTGAAGATATGCTGAAAAGAGATGATGAGAAGTTTACGAGAGAGGAAGCTTGGAAGAAGCAGGAGTTGGATAGGATGAATAAGGAGCTCGAAATGATGGCACACGAGCTAGCTCTGGCAGGCAACCGGCAGGCCACCGTAATAGAATTCTTGAAGAAGTTCGCTGCAAGTTCTCCCAAGGTAGCAAACGATTTAGATTCACAAAACCTTCATTTTTCTGCTGAGATTAATAACGAGAACAATCTAGACCCGTCACCTTCTTCTACAATGAAACCACCAAATCAGCAAGATAAAATAACCAATTCTGTAGCTTTAGCCGTCACGTGCCCTAGTGTTGTAGTAGCAGCAGAAAACCCTGATTCGAGTCATACTCAGGAGGCATTAAAAGTTGCACAGAAACCTAGTTGTCTCTATTCGGTTTCAACACGTAAGCCGTCGTCGAGTGAGAAAGGAGACGTGGGGAGGAGATGGCCGAGGGATGAAGTGTTGGCTTTAATAAACCTGAGATGCAGTTTGAATAACAGCAATGAAGACAGAGGGGGAATCAAGGCTCCACTGTGGGAGAGAATCTCGCAAGGAATGTCAGATATGGGATACAAGAGAAGTGCAAAGAGGTGCAAGGAAAAATGGGAGAACATAAACAAGTACTTCAAAAAAACCAAGGATATTAACAAGAAGAGATCGCTTGACTCTAGGACTTGTTCTTATTTCCATGTACTCACTACTTGGTATTCTCAAGGAAAGCTTGTTCCCGATCCATCTGAATTGAGGTCAGAAAGCCACATGGTTTTGCCTCCACATGGTCAGAAAACGAAGGATATTATGCACGTTGATGGAGGTGAGGATGCTGCTATGCAGTGTACCTGA 1686 0.4478 MFDEVPDHFHQFIVPRTSSLPLHLSFPLNASLTPTTNNTLPTFDPYHYLPLQQPNLLHHPPPPPPPHKHQQDRQDNSTTRVPMNLEIQRQRQSPDLIDSCWTHDEVLALFRIRSGMETWFPDLTWEHVSRKLAELGFKRSAEKCKEKFEEESRYLNHINYIENYRFISEFEQELYQGEGDHQNPEAEVGTEEKSTQQLEKPREGQDKTSCHALEEGSTRHGTSAPIITKRRVVEKSKDRKRRKQGGKFEMFKGFCENIVNRMMTQQEEMHNKLLEDMLKRDDEKFTREEAWKKQELDRMNKELEMMAHELALAGNRQATVIEFLKKFAASSPKVANDLDSQNLHFSAEINNENNLDPSPSSTMKPPNQQDKITNSVALAVTCPSVVVAAENPDSSHTQEALKVAQKPSCLYSVSTRKPSSSEKGDVGRRWPRDEVLALINLRCSLNNSNEDRGGIKAPLWERISQGMSDMGYKRSAKRCKEKWENINKYFKKTKDINKKRSLDSRTCSYFHVLTTWYSQGKLVPDPSELRSESHMVLPPHGQKTKDIMHVDGGEDAAMQCT 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0099 561 MobiDBLite consensus disorder prediction 350 369 - -
Lele05g0099 561 MobiDBLite consensus disorder prediction 179 214 - -
Lele05g0099 561 Coils Coil 296 316 - -
Lele05g0099 561 Pfam Myb/SANT-like DNA-binding domain 428 513 IPR044822 -
Lele05g0099 561 Pfam Myb/SANT-like DNA-binding domain 99 154 IPR044822 -
Lele05g0099 561 MobiDBLite consensus disorder prediction 179 244 - -
Lele05g0099 561 CDD GT1 428 494 - -
Lele05g0099 561 Gene3D - 430 492 - -
Lele05g0099 561 Gene3D - 101 155 - -
Lele05g0099 561 FunFam Trihelix transcription factor GT-2 101 157 - -
Lele05g0099 561 PANTHER FI21293P1 61 528 - -
Lele05g0099 561 ProSiteProfiles Myb-like domain profile. 93 152 IPR001005 -
Lele05g0099 561 MobiDBLite consensus disorder prediction 51 78 - -
Lele05g0099 561 FunFam Trihelix transcription factor GT-2 430 492 - -
Lele05g0099 561 ProSiteProfiles Myb-like domain profile. 429 487 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0099 Lele-ChrLele05 549453 551602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0099 101 519 Trihelix Transcription Factor Family AT5G28300 40.000 5.82e-86 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele05g0099 Myb_DNA-bind_4 3.7e-18 CL0123