Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0097 ATGGAGCAGTATGAAATACTCGAGCAAATTGGAAAAGGTGCTTTTGGTTCTGCTCTTCTTGTGAGGCATAAGCACGAGAAGAAGAAATATGTTTTGAAGAAGATCCGCCTGGCCCGCCAAACTGATCGATCTCGTAGATCTGCGCACCAGGAGATGGAGCTAATCTCTAAATTCAGAAATCCATTTATTGTGGAGTATAAAGATTCATGGGTAGAGAAGGGTTGCTATGTGTGCATTATTATAGGTTACTGTGAGGGTGGAGATATCATTCTGTGCCTGCAGAAACTTTGCAAGTGGCTTGTTCAACTTCTTATGGCGCTTGACTACTTGCACATGAACCATATTCTTCATCGGGATGTCAAGTATACTAATGAAAAAAAATCACATGATACTGATCAGTGTTCAAATATATTTTTGACAAAAGATCAAGACATACGCCTTGGTGATTTTGGACTTGCCAAAATGTTGACTTCAGATGATCTTGCTTCTTCTGTTGTGGGAACACCTAGCTACATGTGCCCTGAGCTCCTTGCTGATATTCCTTATGGTTCTAAATCAGATATTTGGTCGTTGGGATGTTGTATATATGAAATGACAGCACATAAGCCTGCTTTTAAAGCATTTGATATACAAGCACTGATAAACAAGATTAACAAGTCCATAGTGGCCCCACTGCCAACAAAATATTCTGGTGCATTTCGAGGTCTTGTTAAAAGCATGCTGCGGAAAAATCCAGAGCTTAGACCTAGCGCATCGAAGCTACTTGGGCACCCTCATCTTCAGCCTTATGTTCTCAAGATCCATCTTAAAATCAATAACCCCAGACGAAGTACACTCCCAGCAAATTGGCCAGACTCCAAATATGCGAAGAAGACTAGATTTGTGGAGCTAGGAGATTATCCTACTTCCACCTACAGGGATAAGCGGAATTCTTTTAAAAATGACCGGAATTTGAATCCTAGCATATCTGGAGCTGAGCAAGATTCTGTATGCTCTACCCTAGAAATAGATTGTACTCCAGATCATTTGAATCACCGGTTAGCAGAACAGTGCATTGGGGATAGCCCTGAAGCGAACAAAATCCGTAAGCCAGGTGCTTCAAGGAATTCAGGCATTTCTAGAACTTCAAGATTGACATCATCGAAAGCTTTTGCCACCCCTAAGAAACAAATGGAGTTTTCAAAGAATCGTGAGCTGCATCCGATTTCACATAATACCAGAAAATCTCTCCATACAACACGCAGAGCATCATTTCCTTTGCCAAAAGGAGGTGCTTTTCTTGGCCATGTAAACTCACCTCATATTTCAGTCAACTCTCCCCGAATTGACAGGATGGTTGAATTCCCATTATCATCATTTGAGGGTCCACTGTTACCCGTTAATAGAACTTCATCAACCTCTGCACAGGGTTCCTCAGTTTCCCCGCCTTGTGGTGATCGTTCAATCATGAAAGATAAATGCACTGTTGAGGTTTCTGATAGAGCTTCTGTCAGGCCTAGTTTGACGGACGCTTTGCAGAGAATAAAATGCAACACGTATCAGGAAAATGCTGAGGTGAAAAGTGGGTCCTCTGATCAAAATGTAACTGCCGGCGCATCAAGCCATAATTCTTTAGACTGGCATGGCCGGCATTTTGACACTTCATCATACCAACAAAGAGCTGAAGCCTTAGAAGGGTTGCTCGAATTTAGTGCAAGGTTGCTACAACAGGAAAGGTATGAAGAACTCGGGGTCTTGTTGAAACCCTTTGGACCTGGGAAGGTCTCTCCTCGTGAAACTGCTATCTGGTTGAGTAAAAGCTTCAAAGAAAACACTCAACCGTGA 1824 0.4232 MEQYEILEQIGKGAFGSALLVRHKHEKKKYVLKKIRLARQTDRSRRSAHQEMELISKFRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDIILCLQKLCKWLVQLLMALDYLHMNHILHRDVKYTNEKKSHDTDQCSNIFLTKDQDIRLGDFGLAKMLTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTAHKPAFKAFDIQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSASKLLGHPHLQPYVLKIHLKINNPRRSTLPANWPDSKYAKKTRFVELGDYPTSTYRDKRNSFKNDRNLNPSISGAEQDSVCSTLEIDCTPDHLNHRLAEQCIGDSPEANKIRKPGASRNSGISRTSRLTSSKAFATPKKQMEFSKNRELHPISHNTRKSLHTTRRASFPLPKGGAFLGHVNSPHISVNSPRIDRMVEFPLSSFEGPLLPVNRTSSTSAQGSSVSPPCGDRSIMKDKCTVEVSDRASVRPSLTDALQRIKCNTYQENAEVKSGSSDQNVTAGASSHNSLDWHGRHFDTSSYQQRAEALEGLLEFSARLLQQERYEELGVLLKPFGPGKVSPRETAIWLSKSFKENTQP 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0097 607 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Lele05g0097 607 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g0097 607 Pfam Protein kinase domain 4 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g0097 607 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Lele05g0097 607 SUPERFAMILY Protein kinase-like (PK-like) 1 307 IPR011009 -
Lele05g0097 607 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g0097 607 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 562 - -
Lele05g0097 607 MobiDBLite consensus disorder prediction 366 384 - -
Lele05g0097 607 FunFam Serine/threonine-protein kinase Nek2 1 83 - -
Lele05g0097 607 Gene3D Transferase(Phosphotransferase) domain 1 87 321 - -
Lele05g0097 607 MobiDBLite consensus disorder prediction 356 384 - -
Lele05g0097 607 CDD STKc_Nek 3 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0097 Lele-ChrLele05 539860 544055 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0097 10 261 MAP Kinase Kinase Kinase AT1G53570 30.566 7.04e-32 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Lele05g0097 Pkinase 1e-52 CL0016