Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0096 ATGGGGAAGGCGAGCAAGTGGATCAGAAACTTGCTGATAGGAAAGAAGGAAGAGAAGTACAAGCAGATTGATGGAGGAGGCGAGGCGGAGAGCCACAGCTCCAAAGTGAAGCGTAGATGGAGCTTCGGAAGAAAGCCAGTGAAAGTAGCAGAGCATAGACTGCCATCATCTTTTGATTTATCTGACTCTGCTAACCTCCAAACACGAGCTATCCTCCAATCTCATCACCTCCCTTCTTCTCCCATCCGAAATGCAGCGGCGACTAAGATTCAGGCTGCTTTTCGCGCTTATTTGGGAAGAAAAGCATTGCGTGCTCTGAGGGGACTGGTGAAGGTGCAGGCGTTAGTTAGAGGGCACCTCGTAAGGAAGCAAACAACAACCGCACTGCGCGGCATGCATGCGTTGATGACCATTCAGGTCAGAGCCCGAATCCACAGAATTCTGATGGCTCAGCAATCAACCCTTCTCGACAAAAGTCACGTGCGAGAATGTAAAGAATCAGAGGATATGAATCTGGGAGTTTTAAGAAGCAGAAGTGCCCGTCTAGATGGTCCACCTCGTAAGAGCACAGATCATGATTCCAGGACACTAAGTTCAAAGCATCTTTCGGTTTCGAAGAGACACCATCAATACTCAGCACCAAACAGCCCAGCAGACTACTTGGCCATGTGTGGATTAAATCCGACAGAGGGCTTATCCACTTCTCTGCGTCATCACCAATCATATTCGTGCGAACCAAATTACATGACGAGAACAGAGTCATCACGGGCCAAAGCTCGGTCTGAGAGTGAACCAAAACAACGACCCAAACGTGGGATCAGGCACATTAACAAGCATTTAGAACCATTGGATGGTCGAGCGCAACGTTCATTCTTGGCATATAACAAGGCGAGAAATTCAATTTGA 906 0.4812 MGKASKWIRNLLIGKKEEKYKQIDGGGEAESHSSKVKRRWSFGRKPVKVAEHRLPSSFDLSDSANLQTRAILQSHHLPSSPIRNAAATKIQAAFRAYLGRKALRALRGLVKVQALVRGHLVRKQTTTALRGMHALMTIQVRARIHRILMAQQSTLLDKSHVRECKESEDMNLGVLRSRSARLDGPPRKSTDHDSRTLSSKHLSVSKRHHQYSAPNSPADYLAMCGLNPTEGLSTSLRHHQSYSCEPNYMTRTESSRAKARSESEPKQRPKRGIRHINKHLEPLDGRAQRSFLAYNKARNSI 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0096 301 MobiDBLite consensus disorder prediction 243 274 - -
Lele05g0096 301 ProSiteProfiles IQ motif profile. 83 111 IPR000048 GO:0005515
Lele05g0096 301 MobiDBLite consensus disorder prediction 181 200 - -
Lele05g0096 301 Pfam IQ calmodulin-binding motif 110 124 IPR000048 GO:0005515
Lele05g0096 301 Pfam IQ calmodulin-binding motif 85 104 IPR000048 GO:0005515
Lele05g0096 301 Gene3D - 82 134 - -
Lele05g0096 301 MobiDBLite consensus disorder prediction 167 214 - -
Lele05g0096 301 MobiDBLite consensus disorder prediction 255 274 - -
Lele05g0096 301 SMART iq_5 82 104 IPR000048 GO:0005515
Lele05g0096 301 SMART iq_5 105 126 IPR000048 GO:0005515
Lele05g0096 301 ProSiteProfiles IQ motif profile. 107 134 IPR000048 GO:0005515
Lele05g0096 301 PANTHER IQ-DOMAIN 5-RELATED 1 278 - -
Lele05g0096 301 Pfam Protein of unknown function (DUF4005) 211 272 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0096 Lele-ChrLele05 538005 539078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0096 1 269 IQD Protein Family AT4G14750 35.570 1.58e-36 134