Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0092 ATGGAGCTTCCATCGAACCTGTTACCGGACGAGGCGAGCCCAGAGTGGATGAACAAAGGGGACAACGCGTGGCAGTTAACGGCGGCCACGGTGGTGGGCCTCCAAAGTATACCGGGTCTGGTCATCCTCTACGGAAGCCTCGTCAAGAAGACTTGGGCCGTTAACTCTGCTTTCATGGCCTTCTACGCCTTCGCAGCCGTTCTACTTTGCTGGGCTTCTTGGGCTTTCCGAATGTCCTTCGGCGACGAACTAGTTTTCTTCGTGGGAAAACCAGGCGTCGCACTAGACGAAAAGTTTCTGTTGGAGAAGGCGTTTCTGGGGCTGTTTCCTACTGCCACCATGGTGTTCTTTCAGGGCGTGTTTGCCGGAATTGCCTTGATCTTAGTGGCCGGAGCATTACTTGGCCGGATGAACTTTCGAGCATGGATGCTGTTCGTGCCACTCTGGCTCACTTTTTCCTACACCGTCTCTGCCTTTAGCATTTGGTCCCCCAATGGGTGGCTCGCAAAGCGGGGCGTCATTGACTTCTCCGGCGGCTTTGTTATTCATCTCTCTGCCGGCGTTGCTGGCTTCACCGCTGCCTATTGGGTGGGTCCAAGATCAGTTGAGGACAGAGAAGCGGGTCCGGAAACACCAAACAACATGATTATGGTGCTCGCCGGAGCGGGGCTGCTGTGGATGGGGTGGAGTGGATTCAACGGCGGAGGTCCGTTCTCGGTGAGCACGGTGGCATCTCTGGCCGTGTTCAACACACACGTGTGTGCCGCCACCAGCATCATCGTCTGGGTCATCCTCGACGCCTTCTACTTGGGAAAGCCCACCGTTTTTGGCGCCGTGCAGGGCATGATCACCGGCCTCGTCTGCATCACTCCCGGCGCAGGAGTGGTGCAAGGGTGGGCGGCCATCCTGATGGGATTGATATCTGGAAGCGTTCCCTGGTACACCATGACGATTCTCCATGACAAGGTGAGGTTCTTGAAGAATATAGACGACCCCATGGCGGTCTTCCACACCCACGCGGTCGCCGGCGTTCTTGGCGGCATCCTCACCGGCTTCTTCGCAGTTCCAAAACTGTGCCGTCTCTTCTATATGGTGGCCGATTGGGAAAAGTACGTTGGGCTTGCTTATGCGCTTCAGAATGGTTCTACTAATGCGGGTTTGAGGCAGATGGGGATCCAGCTCGGAGCCATAGGGTTCGTGATATGCTTGAACGTGGTCATCACCAGCTTGATATGCTTGCTGGTGAGGGCCATAGTACCACTGCGAGTAGAGATACAAGATCTGGCTGTGGGGGACAAGGCGGTCCATGGAGAGGATGCTTTTGCGTTGTGGAGTGGAGAGGGTGGAAGAATTCAGAATCTGAAGCGCAATAAAGTCTTTGATGCCCAAGAGGATCACCCATCATTTGCCTACAAGTCAACGAGCACAATTCAAATGGTCTAA 1443 0.5502 MELPSNLLPDEASPEWMNKGDNAWQLTAATVVGLQSIPGLVILYGSLVKKTWAVNSAFMAFYAFAAVLLCWASWAFRMSFGDELVFFVGKPGVALDEKFLLEKAFLGLFPTATMVFFQGVFAGIALILVAGALLGRMNFRAWMLFVPLWLTFSYTVSAFSIWSPNGWLAKRGVIDFSGGFVIHLSAGVAGFTAAYWVGPRSVEDREAGPETPNNMIMVLAGAGLLWMGWSGFNGGGPFSVSTVASLAVFNTHVCAATSIIVWVILDAFYLGKPTVFGAVQGMITGLVCITPGAGVVQGWAAILMGLISGSVPWYTMTILHDKVRFLKNIDDPMAVFHTHAVAGVLGGILTGFFAVPKLCRLFYMVADWEKYVGLAYALQNGSTNAGLRQMGIQLGAIGFVICLNVVITSLICLLVRAIVPLRVEIQDLAVGDKAVHGEDAFALWSGEGGRIQNLKRNKVFDAQEDHPSFAYKSTSTIQMV 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0092 480 SUPERFAMILY Ammonium transporter 16 423 - -
Lele05g0092 480 PRINTS Rhesus blood group protein signature 216 234 IPR002229 GO:0005886
Lele05g0092 480 PRINTS Rhesus blood group protein signature 247 269 IPR002229 GO:0005886
Lele05g0092 480 PRINTS Rhesus blood group protein signature 302 320 IPR002229 GO:0005886
Lele05g0092 480 PRINTS Rhesus blood group protein signature 340 356 IPR002229 GO:0005886
Lele05g0092 480 PRINTS Rhesus blood group protein signature 118 134 IPR002229 GO:0005886
Lele05g0092 480 Pfam Ammonium Transporter Family 23 440 IPR024041 GO:0008519|GO:0016020|GO:0072488
Lele05g0092 480 PANTHER AMMONIUM TRANSPORTER MEP2 4 447 IPR001905 GO:0008519|GO:0016020|GO:0072488
Lele05g0092 480 FunFam Ammonium transporter 6 444 - -
Lele05g0092 480 ProSitePatterns Ammonium transporters signature. 175 200 IPR018047 GO:0008519|GO:0016020|GO:0072488
Lele05g0092 480 Gene3D Ammonium transporter AmtB like domains 7 457 IPR029020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0092 Lele-ChrLele05 522578 524218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0092 112 471 Inorganic Solute Cotransporters AT2G38290 52.762 1.60e-122 360