Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0084 ATGGCGAGATTGAAAGAGGCAGAGCCAGACAAGTACAGCATGATTAATTTCGAAGAGACCGAGTTACGACTCGGATTGCCCGGTGCTTCGTCCGCGGCCACCACCGACACCGCCTCTGCCATCAAGACCACCTGGTCTACTGGTGGCAAGAGAGGCTTCTCCGACACCGCTGTGGATTTGAAGCTCAATCTCTCTTCCAACAGTACTGCCCAATCAACCCACAGGCCGACCGACAACACAACTGCCGCTTCTCCCTCTAACGATCCCTCGAAGCCACCCGCCAAGGCACAAGTAGTGGGTTGGCCACCGGTGCGATCATCGAGGAAGAACATCGGGACATCGCAGAGCCAGAAGAATAACAAGGAGGAAGGTGCGACGTTCGTGAAGGTGAGCATGGACGGTGCTCCTTATCTGCGCAAAGTGGACTTGAAATTGTACAAGAGCTACCAACAGCTGTCTGGGGCGCTCGCTAAAATGTTCAGCTCCTTCACCAGCGCCAATTATGGCTCTCCTCAGGCCACCAACGACTTCCTCAACGAGAGCAAATTGATCGATCTCTTGAACGGCACCGACTACGTCCCCACTTACGAAGACAAAGACGGTGATTGGATGCTCGTCGGCGACGTCCCCTGGGAAATGTTCGTGGTATCCTGCAAACGCCTCCGCGTCATGAAAGGATCCGACGCAATTGGGTTAGCGCCAAGGGCAGTGGAGAAGTGCAAGAACAGAAGCTGA 735 0.5469 MARLKEAEPDKYSMINFEETELRLGLPGASSAATTDTASAIKTTWSTGGKRGFSDTAVDLKLNLSSNSTAQSTHRPTDNTTAASPSNDPSKPPAKAQVVGWPPVRSSRKNIGTSQSQKNNKEEGATFVKVSMDGAPYLRKVDLKLYKSYQQLSGALAKMFSSFTSANYGSPQATNDFLNESKLIDLLNGTDYVPTYEDKDGDWMLVGDVPWEMFVVSCKRLRVMKGSDAIGLAPRAVEKCKNRS 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0084 244 MobiDBLite consensus disorder prediction 66 124 - -
Lele05g0084 244 ProSiteProfiles PB1 domain profile. 125 226 IPR000270 GO:0005515
Lele05g0084 244 MobiDBLite consensus disorder prediction 30 51 - -
Lele05g0084 244 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 16 231 IPR003311 GO:0005634|GO:0006355
Lele05g0084 244 MobiDBLite consensus disorder prediction 66 91 - -
Lele05g0084 244 FunFam Auxin-responsive protein 120 236 - -
Lele05g0084 244 Pfam AUX/IAA family 19 235 IPR033389 -
Lele05g0084 244 MobiDBLite consensus disorder prediction 107 124 - -
Lele05g0084 244 SUPERFAMILY CAD & PB1 domains 115 225 - -
Lele05g0084 244 Gene3D - 119 238 - -
Lele05g0084 244 MobiDBLite consensus disorder prediction 27 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0084 Lele-ChrLele05 484054 486103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0084 107 238 B3 DNA Binding Superfamily AT1G30330 26.515 2.33e-07 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lele05g0084 AUX_IAA 1e-80 CL0072