Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0081 ATGGCGAAGGTGAGCCTGAGAAGCCTGGTGTGGGCTTTGTGCGTGGTGAGCGCGGTGGGAATAGCGCGGGCACAGAGCGCCACCAATGTGAGGTCGACGTATCACATGTACCAGCCGGAGCAGCATAACTGGGACCTGATGGCCGTCAGTGCTTTCTGCTCCACCTGGGACGCCGGCGAGCCCCTCTCCTGGCGCAGCAAGTACGGCTGGACCGCCTTCTGCGGCCCCGTCGGCCCCCAGGGTCAGGAAGCCTGCGGCCGCTGCCTCCGTGTCACCAACACCCGCACCGGCGCCCAGCAGACGGTGAGGATTGTGGATCAGTGCAGCAACGATGGCTTGGACCTAGACGTGGGAGTGTTCCAGAAGTTGGACACCGACGGCACGGGCAACGCTCAGGGTCATCTCATCGTCAACTATGACTTTCTGAATAATGGCGGGCCAGGTGGTCAAAGTGAAGAGGGAGACGCTAGAAGCATGCATGACATGCCCTCTCTGTCACAAACTGTTGAAGGATGCTACTACTATCTCTCTCTGCCTTCATACGTGAAATGCATATATGAGAGATTCTCAGATGACGAGGCAGATTGCTGTCCAGTATGCAATATTGATTTGGGCTGTCTTCCGGTGGAAAAACTGAGGCCAGATCACAATGTGCAAGATATTAGAGCCAAAATATTCCCTTTGAGACGAAGAAAGATTAGGGCCCCAGAGGCAATACCTTCAGTAACTCTGCCAGCAAAAAGGAAGGAAAGATCACTCTCATCATTGGTGATTTCTGCTCCCAAAGTTTCCATTCAGACTGGCTTCACCGGAAAGAGAACGAAAACTGGTACCAGAAAGGCTGCTGCTTTACGTGGATGCAATTTTTCTGTTCATGAATCCATAAAGAAGGAAGAAGTATATTCTGAGGATAACCTAGTAAGCTCAAGCTCACCTGATTTATCAAATGTAATTTCTCAAAATAGAAGTCAGAATTCTTCCACAGCTGAGCCTTCTAAGAGGAATAGGCCTAATGAAGATACAGAGAACAATGTGGAACTTCCAGAAGGGAAAGTTGATCTCTGGACACCCTTGAACTGTCTTGTTGAAGCTGCCAACAGGACAAAATCCTCAAAGTTAACTTCGCAAGGCTTGTCTATTGCCAAGTCCGAGCCGCCGACTACTCCCTATGGTGGACTAATTATGCCTGAAATTACAACCAAAGCCGAGTCACCCGCTACTGTCCATAGTGAATTACGTATGCCTAAAACCAAAAGCAAGGATAATGGGCATAAAACAAAATTTGGAGATGACAAGGATGAAAATGTTGTGCCTCCAGGACAAGTGAGGGGGAGAAGGGTGCGTCCAGCTGGTCAGAAAAGAGCTGCAGCATCCGAGAGTTCTGCCTCAGCCCAAGTTACGCTAGATGCAGCTGGGGGCAGGTGTGACAGAGAACACTGTCCTATTTGGTTTTCATTGGTTGCTTCAGAAGATCAGAAAGGAGATGTTTCCTTGCCGCAGATTTCAGCATGCTACTTAAGAATACAGGACAGTAGTGTGCCCGTCTCCTTTATTCAAAAGTACCTTGTTAAGAAACTTAATCTTGCCAGCGAAGCAGAGGTCGAGATAATGTGCCGTGGTCGGCCAGTGCTGCCATCTCTGCAACTGTATAACTTAGTTGATCTCTGGTTCAGGACTGCGTCTTCCTCTAAAAAGATTCCTGCTTCTGTTGGCTCCTCCGCCAAGGACTTCGTTATGGTTCTATCATATTGTCGAAAGCCCCTCCCTCCTTAG 1773 0.4952 MAKVSLRSLVWALCVVSAVGIARAQSATNVRSTYHMYQPEQHNWDLMAVSAFCSTWDAGEPLSWRSKYGWTAFCGPVGPQGQEACGRCLRVTNTRTGAQQTVRIVDQCSNDGLDLDVGVFQKLDTDGTGNAQGHLIVNYDFLNNGGPGGQSEEGDARSMHDMPSLSQTVEGCYYYLSLPSYVKCIYERFSDDEADCCPVCNIDLGCLPVEKLRPDHNVQDIRAKIFPLRRRKIRAPEAIPSVTLPAKRKERSLSSLVISAPKVSIQTGFTGKRTKTGTRKAAALRGCNFSVHESIKKEEVYSEDNLVSSSSPDLSNVISQNRSQNSSTAEPSKRNRPNEDTENNVELPEGKVDLWTPLNCLVEAANRTKSSKLTSQGLSIAKSEPPTTPYGGLIMPEITTKAESPATVHSELRMPKTKSKDNGHKTKFGDDKDENVVPPGQVRGRRVRPAGQKRAAASESSASAQVTLDAAGGRCDREHCPIWFSLVASEDQKGDVSLPQISACYLRIQDSSVPVSFIQKYLVKKLNLASEAEVEIMCRGRPVLPSLQLYNLVDLWFRTASSSKKIPASVGSSAKDFVMVLSYCRKPLPP 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0081 590 ProSiteProfiles Barwin domain profile. 25 146 IPR001153 GO:0042742|GO:0050832
Lele05g0081 590 PRINTS Barwin domain signature 60 78 IPR001153 GO:0042742|GO:0050832
Lele05g0081 590 PRINTS Barwin domain signature 79 97 IPR001153 GO:0042742|GO:0050832
Lele05g0081 590 PRINTS Barwin domain signature 98 116 IPR001153 GO:0042742|GO:0050832
Lele05g0081 590 PRINTS Barwin domain signature 119 143 IPR001153 GO:0042742|GO:0050832
Lele05g0081 590 MobiDBLite consensus disorder prediction 403 461 - -
Lele05g0081 590 Pfam Barwin family 26 143 IPR001153 GO:0042742|GO:0050832
Lele05g0081 590 Gene3D - 25 145 IPR036908 -
Lele05g0081 590 FunFam Papaya barwin-like protein 25 146 - -
Lele05g0081 590 ProSitePatterns Barwin domain signature 1. 85 93 IPR018226 GO:0042742|GO:0050832
Lele05g0081 590 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 182 588 IPR044807 GO:0004842
Lele05g0081 590 MobiDBLite consensus disorder prediction 413 439 - -
Lele05g0081 590 MobiDBLite consensus disorder prediction 333 347 - -
Lele05g0081 590 Gene3D - 463 566 - -
Lele05g0081 590 SUPERFAMILY Barwin-like endoglucanases 25 143 IPR036908 -
Lele05g0081 590 MobiDBLite consensus disorder prediction 369 390 - -
Lele05g0081 590 MobiDBLite consensus disorder prediction 304 332 - -
Lele05g0081 590 MobiDBLite consensus disorder prediction 369 383 - -
Lele05g0081 590 MobiDBLite consensus disorder prediction 300 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0081 Lele-ChrLele05 467608 474228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0081 183 509 C3H Transcription Factor Family AT2G30580 41.692 8.73e-67 219