Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0055 ATGAAACCTCTAGATTCTTTTTCCTCTACTGCACGAGACCTGACTTCAAATCCTGCCTCAGTGCAGGCTGCTTCATCAAATTCGAACCTCAGAAGTGGTGGACACATGTTTTCATCACCTTCTAAATGCCTGAATGACATCTCTTTTTCCTCAATTTCACAACATGATAGGCAGTATCAAGATTCTCCCTTCATTTCTAAGTCATTGAGAAGAGATGATGTGATGCCCCGGCTAGGAGCTTCCCTTACTCAGAGTGGGGAAGATGCGTCCTTCCCTCCTTCACATTCTTCTCATCCAGAAATACATTCGGCAGCATTCATATCTCAACCCCCGGAAAGTGATCATATTTCCTGGGGACCGGATCCCTTTCAGGATATTCTTAATCTCTCTGTAAACGACTCCAGCCGGAATGATCAGATAGAAACTAGTTCTTGTTATATGTCTGATGACTACACCAAAAAAACTGATTTTGGGGAGTGGGTAGATCAGTTAATATCAGTTGATGAATCTCCTCATCCAAACTGGAGCCAGCTTCTTGTTGATGATAACGGGCCTGATTCTAAATCAAAGGAGACCCATGCCACCAAACAGCAGCATGCACCATCTGGAGAAGTTAATGCTCCTCCTAGTTCAGCCTCGAGTGCACTGCAAAGTAAGCCTAGAATGCGTTGGACTCCAGAACTTCATGAAGCTTTTGTGGAAGCAGTGAATAAGCTTGGCGGTAGCGAGAAGGCTACTCCAAAGGGTGTTTTGAACTTAATGAGATTTGAGGGTCTTACTATCTATCATGTGAAAAGCCATCTACAGAAGTATAGAACAGCCAGATTCAAACCCGAATCATCAGGAGGAGCTTCTGAGAAGAAGTCATCAGCCAAAGAAATGAAATCTTCAGACTTGACAGCTAGCATGGGGATTACTGAAGCATTGCGGTTGCAGATGGAACTCCAGAAGCGGCTTCATGAACAACTTGAGATTCAAAGAAAGTTGCAGCTTCAAATAGAAAACCAAGGGAAGCGTCTTCAGGTGATGTTTGAGAAACAAAGGGAGATGGAGGACTGCAAGCACAAGACATCCTCCCCCTCCTCCCTGGACAGGCCCACGGTATTAACTTCCCCCACAATTGAGGGTCAAGAAACCTTAAACGAGGATCAAGAAAAATCTGGAATCGGCAATATCAATGCAACAACCATGGGCGAAGAATGTTCTGAGGATGGCTGCACAAATCAGGAGGTGGAAGAAACTAAAGTTATTAATGAAGAAGAGGTGGGGCATGATCAGTTGGATGCACCAGCCTCCAAACGGGTGAAAAGTAGATAA 1317 0.445 MKPLDSFSSTARDLTSNPASVQAASSNSNLRSGGHMFSSPSKCLNDISFSSISQHDRQYQDSPFISKSLRRDDVMPRLGASLTQSGEDASFPPSHSSHPEIHSAAFISQPPESDHISWGPDPFQDILNLSVNDSSRNDQIETSSCYMSDDYTKKTDFGEWVDQLISVDESPHPNWSQLLVDDNGPDSKSKETHATKQQHAPSGEVNAPPSSASSALQSKPRMRWTPELHEAFVEAVNKLGGSEKATPKGVLNLMRFEGLTIYHVKSHLQKYRTARFKPESSGGASEKKSSAKEMKSSDLTASMGITEALRLQMELQKRLHEQLEIQRKLQLQIENQGKRLQVMFEKQREMEDCKHKTSSPSSLDRPTVLTSPTIEGQETLNEDQEKSGIGNINATTMGEECSEDGCTNQEVEETKVINEEEVGHDQLDAPASKRVKSR 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0055 438 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 195 410 IPR044848 GO:0003700
Lele05g0055 438 MobiDBLite consensus disorder prediction 198 220 - -
Lele05g0055 438 MobiDBLite consensus disorder prediction 408 438 - -
Lele05g0055 438 MobiDBLite consensus disorder prediction 1 37 - -
Lele05g0055 438 MobiDBLite consensus disorder prediction 54 115 - -
Lele05g0055 438 MobiDBLite consensus disorder prediction 352 438 - -
Lele05g0055 438 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 219 273 IPR006447 GO:0003677
Lele05g0055 438 Pfam Myb-like DNA-binding domain 221 272 IPR001005 -
Lele05g0055 438 Pfam MYB-CC type transfactor, LHEQLE motif 303 349 IPR025756 -
Lele05g0055 438 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 216 276 IPR017930 -
Lele05g0055 438 Coils Coil 306 326 - -
Lele05g0055 438 MobiDBLite consensus disorder prediction 171 220 - -
Lele05g0055 438 MobiDBLite consensus disorder prediction 360 403 - -
Lele05g0055 438 MobiDBLite consensus disorder prediction 8 37 - -
Lele05g0055 438 SUPERFAMILY Homeodomain-like 217 273 IPR009057 -
Lele05g0055 438 MobiDBLite consensus disorder prediction 273 299 - -
Lele05g0055 438 FunFam Myb family transcription factor 218 276 - -
Lele05g0055 438 Gene3D - 218 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0055 Lele-ChrLele05 355402 357828 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0055 14 363 G2-like Transcription Factor Family AT3G04450 43.784 4.62e-77 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele05g0055 Myb_DNA-binding 1.2e-08 CL0123