Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0047 ATGTTGTCATTGCAGCTTTGGGGTTTCTCTGTTTCATCATCTTTATTACATCTTAGCTCTATAATCTTTTGCTCTGTAAGACAAGGCTTGAATTTCATAAATCCGACCAATGTGTTTGAGGCTAAAAAGTGTTGTGCTGTGGCTCAGTGCTTTCTCTTGCTGCAATCTTATCTAGGTTTTAATACTGCATTTGGTTCAAGGGGAATTTCAGACATCTGGATCAACATATTTGTTGATTGCCAGTCATTTTTGAAGACACTGGATCTTTGCATTACCTGCAATAATAACACAAGCAAGTGCAGATATATTTGGTATTGCCTTTGTAAGAGGTTACTAATGGGGACAGAACTCATGAGAACATGTGTTCAAGAAGAGAACGATGAGTTTCCATCAGTTCCGCCTGGCTTTGAGTCGTATACATCTTCCTTACTGAATAGGGGGGAAGGCATTGAGAAACAGAATGATAAAGACATGATTAGTTTTTCCGTCTCTGCAAGTGTTTCTAATTGTAAATCACAGTCAACTCAGGGGACAACTGATGTTCAAGTTAGTGATAATGCAAAGGTTCCTAGGTCCGTTCGACGAAGACGATGGATCAACCATGGACAATATGATAACAGTTCAGAGGAAGACTCTGATTCTGAGCGGCTTGATCAAAATTTTTCGTCAGCGCCTTGTCTTCCAAAGGGAGTTATCCGTGGGTGTCCAGATTGCAGTAATTGCCAAAAGGTTATTGCCAGATGGAGACCAGAAGATGCTTGCAGGCCCACCCTTGAGGATGCTCCTGTTTTTTACCCAACTGAAGAGGAGTTCAAAGATACCATGAAATATATAGCAAGTATTTGTTCCAGAGCAGAACCATATGGCATTTGTCGCATTGTTCCCCCTTCATCTTGGAAGCCCCCTTGTCCTCTTAAGGGAAAGACTATATGGGAGGGTTCTAAATTTGCTACTCGTGTTCAGAGGATTGATAAGCTTCAGAACCGTGATTCAATGAGAAAGATGTCAAGGATTCATTTTAATACTAGACGGAAAAGGAAAAGATGCCCTAGAATGGGATTGGATAATGGCAGTAATAGAGGACCTAATGCAGGCTTTTGTGAGATTGAAAGGCCCTTTGGGTTTGAACCTGGCCCAGAATTTACTTTGGAAACATTTCAGAGATATGCAGATGAATTTAAGGACAGATACTTCAGAAAGAATGAGAGTATATCCAATATGGGAGGTAACACACCAATGTCAAAAGGATGGGAGCCTTCTGTGGAGAACATAGAGGGTGAATATTGGCGAATGGTGGAGAGACCTACTGAAGAAATTGAGGTGCTTTATGGAGCTGACCTGGAAACTAGGGTTTTTGGGAGTGGTTTCCCCAGAAAGCTTAGTGAAGTTGGTTCTGATTCACACAAAGAGTACACAAAGTCTGGCTGGAATTTAAATAACTTTGCCAGGCTTCCTGGATCTCTACTTTCATATGAAAGCGGCGATATATCTGGTGTCCTTGTGCCCTGGTTGTATATAGGAATGTGCTTTTCTTCCTTTTGTTGGCATGTGGAGGATCACCATTTATATTCTTTGAATTACATGCATTGGGGTGCTCCAAAAATGTGGTATGGTGTCCCTGGCAAATATGCTTGCAAATTGGAAGAGGCCATGAGAAATCATTTACCAGACCTTTTTAAAGAGCAACCTGATTTGCTTCATAAGCTGGTCACTCAGCTTTCTCCTTCTATCCTTAAGTCTGAAGGAGTACCTGTCTATAGGTGTGTCCAGCATGCTGGAGAGTTTGTTCTGACATTCCCTCGAGCTTATCATTCTGGATTGAATTGTGGCTTCAACTGTGCAGAGGCTGTAAATGTAGCTCCAGTTGACTGGCTGCCCCATGGGCAGATTGCCATTGAGCTATACCGGGAGCAAGGACGTAAGACTTCTATATCTCACGATAAACTGTTGCTTGGGGCTGCTAGGGAAGCAGTACGATCACTGTGGGAGCTTAATCTGCTGAAGAAGAATACTTCAGATAATCTAGGATGGAAAGATGCCTGTGGCAAAGACGGTGTTCTAGCAAAAGCACTCAAGACACGCGTTGAGATGGAACAAGTAAGGAGGAAATTTCTCAGCAGTTCTTCACAGGCACTGAAAATGGAGAGCAGTTTTGATGCCACAAGTGAAAGGGAATGCAGTATTTGCTATTTTGATCTACACTTATCTGCAGCTGGTTGCCACTGTTCCCCTGACCGATATGCTTGCTTGGATCATGCAAAGCAGTTCTGTTCTTGTGCTTTGGATTCCAAATTCTTCCTCTTCCGTTATGATATTAGTGAATTATTTATCCTTGTTGAGGCATTGGAAGGAAAATTAAGTGCAGTATACAGATGGGCAAAATTAGATCTTGGGCTGGCACTAACTTCTATATTAAAAGACAAAAGCCAATGTAGCAACTTGATTCAGCCTTCAAAGGAAACAATGCTTCACAAATTTAGATTAGATTCCTCAGATCTGTCTGGTTCTTCTTGTGGCACTATGCTTAAAGAGATGACATTGCATCCTTCAGTTGTTGCTATTGAAGATTCTCACTTGATAGATGTCCCGATAGAGAATCTGATGACTTCCGCAAAAAGCACTGATCAGGGTTTTATAAAACTAAGAAAATCAGCGGAAGATGCAATTCCCTTGGGTTATTCAAAAGAACTGTCTGCATCTAATGGCTGGACAACCCCATGTGAGATGACTAATCATGAGAGATATTCCGAGAAACAATCAATCATTTGCAAATCTGCTGACAGGAATCCTGTTCTTCAGTTGCCTGTAGGGGACACTTCATATTCTTTACCTCTTACTCTTGCTGAACATGGAGCTAAGAAAACTCCTCGTGGGCACGATAATATTATACTTCTTAGTGATGACGAAACTGATGAACCTAAGATGACGGAAACAGATAACAAGAAGGAGCTTTCTCAAAGGTTTTTAGGTTCTTGTGATAATCTAAACCTGTCTAATTATAAAGAAGATCCCGACGGGACTATCCCTGTCACAGATACTGCTTTAAAGGTTGGGAATGAAGTGCCTCATGAAAATATGAGTTCTCATTCAACTTATCATTTCCACGTGAAACAGGAACATGATATAATTAAGGGAGCAGTTTTAGATTCTACTCCAGTAGATTTTTCCTGCAATATAGGTTATGGTAGTGCAGAATCAGTCAGACAAATTCAGGCTTCCTCAACAGGAGAGAGTAGAGATCATTGTCTGGATTCTTCTGGGAGTTTTCCTATGAATCCATGGCATTCTGGGACTGTCAAGCCTAAGAATGACCACAACCATGAGAAGATTGGAGTATGTAGTACAGATAATGCTAGAGCTGCTAATGGAAACCTGTCTGGCAGTCGAAACAATTTGGGAAGATACTATCGTCAGAAAGGCCCTCGTATAGCAAAGGTTGTCCGTCGGATCAACTGCAATGTTGAGCCTCTAGAATTTGGTATTGTGTTTTCTGGAAAGTCATGGTGCAACAGTCGGACTATATTTCCAAAGGGATTTAGAAGCCGTGTAAGATACATAAATGTCTTAGATCCAACAAGCATGTGTTATTATATTTCAGAAATTCTTGATGCTGGACGTGATGGGCCTCTGTTTATGGTGTCCCTGGAACATCACCCAAGTGAGGTCTTCATTCATCTTTCTGCTGGTAGATGCTGGGAACTGGTCAGAGAGAGAGTGAATCAGGAGATCACAAAGCAACATAAGCTGGGAAAAAAGGACCTTCCTCCTTTGCAGCCACCTGGCAGCATTGATGGATTTGAAATGTTTGGGTTATCTTCGCCTGCAATAGTGCAGGCTATCGAGGCATTGGATCAAAATCGTGTCTGCAAGGAATATTGGGATTCGCGGCCCTATTCACGGCCTCTAGGGCATATTCAGCAAGCTTCACAGCCCAAAGAAAATAGTGGAAGCGCGGATAGGCCATGCCAGGGGGGAAATGTTCAAGGGGCTCACTGGAATGAGGTCATGCCTTTTGGAATAGATGCAGTATTAAGGAGGCTGTTAAAAAAGGCCGATGCACAAGAATTGAACTCATTGTGGAGCATTCTTTGTGAAAATAACAATACCGTAGCTGAGGGCAGCCAAATTGTTCAACTTCTCAATGAAGAGATCAGAAGTCGTCCCAGATGA 4170 0.4199 MLSLQLWGFSVSSSLLHLSSIIFCSVRQGLNFINPTNVFEAKKCCAVAQCFLLLQSYLGFNTAFGSRGISDIWINIFVDCQSFLKTLDLCITCNNNTSKCRYIWYCLCKRLLMGTELMRTCVQEENDEFPSVPPGFESYTSSLLNRGEGIEKQNDKDMISFSVSASVSNCKSQSTQGTTDVQVSDNAKVPRSVRRRRWINHGQYDNSSEEDSDSERLDQNFSSAPCLPKGVIRGCPDCSNCQKVIARWRPEDACRPTLEDAPVFYPTEEEFKDTMKYIASICSRAEPYGICRIVPPSSWKPPCPLKGKTIWEGSKFATRVQRIDKLQNRDSMRKMSRIHFNTRRKRKRCPRMGLDNGSNRGPNAGFCEIERPFGFEPGPEFTLETFQRYADEFKDRYFRKNESISNMGGNTPMSKGWEPSVENIEGEYWRMVERPTEEIEVLYGADLETRVFGSGFPRKLSEVGSDSHKEYTKSGWNLNNFARLPGSLLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKYACKLEEAMRNHLPDLFKEQPDLLHKLVTQLSPSILKSEGVPVYRCVQHAGEFVLTFPRAYHSGLNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAAREAVRSLWELNLLKKNTSDNLGWKDACGKDGVLAKALKTRVEMEQVRRKFLSSSSQALKMESSFDATSERECSICYFDLHLSAAGCHCSPDRYACLDHAKQFCSCALDSKFFLFRYDISELFILVEALEGKLSAVYRWAKLDLGLALTSILKDKSQCSNLIQPSKETMLHKFRLDSSDLSGSSCGTMLKEMTLHPSVVAIEDSHLIDVPIENLMTSAKSTDQGFIKLRKSAEDAIPLGYSKELSASNGWTTPCEMTNHERYSEKQSIICKSADRNPVLQLPVGDTSYSLPLTLAEHGAKKTPRGHDNIILLSDDETDEPKMTETDNKKELSQRFLGSCDNLNLSNYKEDPDGTIPVTDTALKVGNEVPHENMSSHSTYHFHVKQEHDIIKGAVLDSTPVDFSCNIGYGSAESVRQIQASSTGESRDHCLDSSGSFPMNPWHSGTVKPKNDHNHEKIGVCSTDNARAANGNLSGSRNNLGRYYRQKGPRIAKVVRRINCNVEPLEFGIVFSGKSWCNSRTIFPKGFRSRVRYINVLDPTSMCYYISEILDAGRDGPLFMVSLEHHPSEVFIHLSAGRCWELVRERVNQEITKQHKLGKKDLPPLQPPGSIDGFEMFGLSSPAIVQAIEALDQNRVCKEYWDSRPYSRPLGHIQQASQPKENSGSADRPCQGGNVQGAHWNEVMPFGIDAVLRRLLKKADAQELNSLWSILCENNNTVAEGSQIVQLLNEEIRSRPR 1389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0047 1389 Pfam jmjN domain 262 295 IPR003349 -
Lele05g0047 1389 SUPERFAMILY Clavaminate synthase-like 437 663 - -
Lele05g0047 1389 SMART JmjN_1 260 301 IPR003349 -
Lele05g0047 1389 ProSiteProfiles FYR domain FYRC motif profile. 1206 1296 IPR003889 GO:0005634
Lele05g0047 1389 MobiDBLite consensus disorder prediction 1304 1326 - -
Lele05g0047 1389 Pfam F/Y-rich N-terminus 1160 1201 IPR003888 GO:0005634
Lele05g0047 1389 MobiDBLite consensus disorder prediction 199 217 - -
Lele05g0047 1389 Pfam C5HC2 zinc finger 726 775 IPR004198 -
Lele05g0047 1389 Pfam F/Y rich C-terminus 1208 1292 IPR003889 GO:0005634
Lele05g0047 1389 Gene3D - 1154 1290 - -
Lele05g0047 1389 SMART fyrn_3 1160 1204 IPR003888 GO:0005634
Lele05g0047 1389 MobiDBLite consensus disorder prediction 1304 1322 - -
Lele05g0047 1389 FunFam Putative lysine-specific demethylase JMJ16 1152 1290 - -
Lele05g0047 1389 ProSiteProfiles JmjC domain profile. 473 636 IPR003347 -
Lele05g0047 1389 MobiDBLite consensus disorder prediction 199 218 - -
Lele05g0047 1389 ProSiteProfiles JmjN domain profile. 261 302 IPR003349 -
Lele05g0047 1389 SMART cupin_9 470 636 IPR003347 -
Lele05g0047 1389 SMART fyrc_3 1210 1304 IPR003889 GO:0005634
Lele05g0047 1389 ProSiteProfiles FYR domain FYRN motif profile. 1146 1204 IPR003888 GO:0005634
Lele05g0047 1389 Pfam JmjC domain, hydroxylase 503 619 IPR003347 -
Lele05g0047 1389 Gene3D Cupin 246 620 - -
Lele05g0047 1389 PANTHER LYSINE-SPECIFIC DEMETHYLASE 253 1284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0047 Lele-ChrLele05 302856 314786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0047 113 1387 JUMONJI Transcription Factor Family AT1G08620 53.086 0.0 1212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Lele05g0047 JmjC 8.1e-46 CL0029