Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0041 ATGGACCAATCAGTTCTCGATGACATAATCAATCGTCTCCTTGAAGTCCGCGGTCGTCCGGGCAAGCAGGTTCAGTTGTCCGAGTCCGAGATCCGTCAGCTTTGCCTTGTTTCCAGAGATATTTTACTGCAACAGCCCAATTTATTGGAGCTTGAAGCACCCATTAAGATTTGTGGCGATGTACATGGTCAGTATTCTGATCTTTTACGTCTCTTTGAGTATGGCGGATTACCTCCGCATGCCAACTATTTGTTTTTAGGGGATTATGTGGACCGAGGGAAGCAGAGTTTGGAAACAATATGCCTTCTCCTTGCTTATAAAATAAAATATCCTGAGAACTTTTTCCTGTTGAGGGGGAACCATGAATGTGCTTCTATAAACCGTATATATGGATTTTATGATGAGTGTAAGAGAAGGTTCAATGTAAGGTTATGGAAGACATTTACTGAGTGTTTCAACTGCCTACCTGTGGCGGCCCTTATTGATGAAAAGATTCTGTGTATGCATGGGGGACTTTCTCCTGACTTGCATAATTTGGATCAGATCAGAAATCTACAGCGTCCAACTGATGTCCCAGATACAGGCTTGCTTTGTGATCTTCTTTGGTCAGACCCGAGCAAAGATGTTCAAGGTTGGGGAGTGAATGACAGGGGAGTTTCATATACATTTGGTGCTGATAAGGTCTTAGAATTTCTTCAGAAACAAGATCTGGATCTTATTTGTCGTGCTCATCAGGTTGTAGAGGATGGTTACGAGTTCTTTGCTGACCGACAGCTAGTAACAGTATTTTCAGCACCTAATTATTGTGGAGAGTTTGACAATGCTGGTGCTATGATGAGTGTTGATGAGACACTAATGTGCTCGTTCCAAATATTAAAGCCAGCGGATAAAAAACCAAAGACCAATTTTGGAAGCAGTACAACAACTGCTAAGCCTGGAAATTCTCCAGCGCGTATAAAGTCTTTCCTGGGTACAAAGTTTTGA 984 0.4228 MDQSVLDDIINRLLEVRGRPGKQVQLSESEIRQLCLVSRDILLQQPNLLELEAPIKICGDVHGQYSDLLRLFEYGGLPPHANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKTFTECFNCLPVAALIDEKILCMHGGLSPDLHNLDQIRNLQRPTDVPDTGLLCDLLWSDPSKDVQGWGVNDRGVSYTFGADKVLEFLQKQDLDLICRAHQVVEDGYEFFADRQLVTVFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKPKTNFGSSTTTAKPGNSPARIKSFLGTKF 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0041 327 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 9 301 - -
Lele05g0041 327 Pfam Calcineurin-like phosphoesterase 54 246 IPR004843 GO:0016787
Lele05g0041 327 Pfam Serine-threonine protein phosphatase N-terminal domain 6 52 IPR031675 -
Lele05g0041 327 PRINTS Serine/threonine phosphatase family signature 83 110 IPR006186 GO:0016787
Lele05g0041 327 PRINTS Serine/threonine phosphatase family signature 150 176 IPR006186 GO:0016787
Lele05g0041 327 PRINTS Serine/threonine phosphatase family signature 54 81 IPR006186 GO:0016787
Lele05g0041 327 PRINTS Serine/threonine phosphatase family signature 179 206 IPR006186 GO:0016787
Lele05g0041 327 PRINTS Serine/threonine phosphatase family signature 236 256 IPR006186 GO:0016787
Lele05g0041 327 PRINTS Serine/threonine phosphatase family signature 116 140 IPR006186 GO:0016787
Lele05g0041 327 PRINTS Serine/threonine phosphatase family signature 258 274 IPR006186 GO:0016787
Lele05g0041 327 SMART pp2a_7 26 296 IPR006186 GO:0016787
Lele05g0041 327 Gene3D - 1 305 IPR029052 -
Lele05g0041 327 ProSitePatterns Serine/threonine specific protein phosphatases signature. 117 122 IPR006186 GO:0016787
Lele05g0041 327 SUPERFAMILY Metallo-dependent phosphatases 17 298 IPR029052 -
Lele05g0041 327 CDD MPP_PP1_PPKL 5 294 - -
Lele05g0041 327 FunFam Serine/threonine-protein phosphatase 52 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0041 Lele-ChrLele05 279087 282489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0041 33 239 Calmodulin-binding Proteins AT5G63870 31.452 1.09e-27 108