Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0038 ATGGAATCCAACGAGAACCAGCTCAGCTCCTACTTCCACCACCAGCAACAGCAGACCGCCGCCCCCGCCACCACATCCTCCCCGACCAATGGCCTCTTACCCACCACTGACGCCTCCCACATGGTCTTCCCTCATTCCGTGCCCTCCGCCGTCTCCTCTCAATTAGAACCCCCAAAGAGGAAGAGGGGCAGGCCCAGGAAGTACGGCACCCCCGAGCAAGCTCTAGCCGCCAAGAAAGCTGCCACCTCCTCCTCTCACTCTTTCAACAGGGATAAAAAGGCCCACGCTTTGGGCAGTCCCTCTGCTTTATCTTCGTACACAGCCTCCTCCAAGAAATCCCAGTTCTCTTCTCTATGTCAAGGCTTCACCCCACATGTCATCGCTGTTGCTGCTGGTGAGGATGTTGGCCAAAAAATTATGTTGTTCATGCAACAAAGTAGGCGGGAAATGTGCATCTTGTCCGCATCTGGTTCTATCTCTAATGCCTCTCTTCGTCAGCCTGCAACCTCTGGAGGGAATATCGCATATGAGGGTCGATTTGAGATTATTTCACTTTCTGGTTCCTATGTCCGTACTGAACTTGGAGGGCGCACTGGTGGTCTTAGTGTATGCTTATCGAGTACTGATGGTCAAATCATAGGTGGAGGAGTTGGTGGACCCCTAAAAGCTGCTGGTCCAGTTCAGGTCATTGTTGGCACATTTTTTCTGGATGCCAAGAAAGATGCTGGAGCTAGTGCTGGTGTAAAAGGCGATGCTTCTGGGAGCAAGTTGGCATCATTGGTTGGGGAATCGGTTTCAAGTTTAGGTTACCAGCCGGGCATAGAAACTTCCAGTGGGAATCCTATTCGAGGGAATGATGATGATCATCATGCTGTTGGAGGGAGTCATTTCATGATTCAACAACGTGGTGTGCATGTGACACCTTCCCAGCCCACAGAGTGGTGGGCTCGTCCTGATTCCAGAAATGCTGGCTTTGAGCAGATGACAGGAAAGACAGGCCATGGGGCTCACCAATCTCCAGAGAATGGGGATTATTTAACATGA 1044 0.5144 MESNENQLSSYFHHQQQQTAAPATTSSPTNGLLPTTDASHMVFPHSVPSAVSSQLEPPKRKRGRPRKYGTPEQALAAKKAATSSSHSFNRDKKAHALGSPSALSSYTASSKKSQFSSLCQGFTPHVIAVAAGEDVGQKIMLFMQQSRREMCILSASGSISNASLRQPATSGGNIAYEGRFEIISLSGSYVRTELGGRTGGLSVCLSSTDGQIIGGGVGGPLKAAGPVQVIVGTFFLDAKKDAGASAGVKGDASGSKLASLVGESVSSLGYQPGIETSSGNPIRGNDDDHHAVGGSHFMIQQRGVHVTPSQPTEWWARPDSRNAGFEQMTGKTGHGAHQSPENGDYLT 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0038 347 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 17 256 IPR039605 GO:0003680
Lele05g0038 347 MobiDBLite consensus disorder prediction 269 293 - -
Lele05g0038 347 MobiDBLite consensus disorder prediction 313 347 - -
Lele05g0038 347 Gene3D - 124 249 - -
Lele05g0038 347 MobiDBLite consensus disorder prediction 1 96 - -
Lele05g0038 347 CDD DUF296 123 234 IPR005175 -
Lele05g0038 347 ProSiteProfiles PPC domain profile profile. 115 261 IPR005175 -
Lele05g0038 347 MobiDBLite consensus disorder prediction 1 36 - -
Lele05g0038 347 SUPERFAMILY AF0104/ALDC/Ptd012-like 120 234 - -
Lele05g0038 347 Pfam Plants and Prokaryotes Conserved (PCC) domain 124 234 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0038 Lele-ChrLele05 262010 267292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0038 38 345 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 54.434 6.46e-96 289