Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0025 ATGATCGCTAGGGCAGGCGATGAGCTGGTGATGGTGAGCAGAGAATATCCATGGATGGCCGATACTCACAAGGAAAGCCCCCGAGGCAAGCAAGCGTATATGTGCGGGAGACCAAGTTTGGGGACCCTGTCAAAGGACCTGGAAATGACCGCCCTCAAACTCCTGCCCTTCATTCATATAATATTTCTCCTCTGCAGCTTCCGTCGGCCGGTTGCAGCTCAATGCGTCCTCAATCTCAGCGCATATCCCTACGTGGGATACCAGGAGTGCGGTCGCGTTCAGGATCAGATGGATCAATGGGACGGCTTCCCTAACAGCCTCTGCTGCCGCAATGCCCTCACCGTCTTCTCACAAGCTTTGGCCCTGCAAGCCCGCAACTCCCCCCAGCAGGCCGCCCTCTTTATTCCCAACACTCAATGGGACGCCTGTTCCAACGCCTTTTACCTCCGACAGGGCATTTCTCCCGATTCATGCGGCTTCCACAGCTTGTACCTCGGCGCCTCCAAATGCTCCAACCTCGAACTCCCCGACATTCAGGGCCAGCAATTCTACCAAACCGCCCTCGACCAATGCGGCCACTTCGACCGTCCCTCTCCACATTCTTGTGCCGGCTGCGTCTCCGCCGTCTTGAATATCAGAGACTCTCTCTATGACCAATTAGTCGGCAGTCAGGACATTCCCCTCGAAAGAGCCGTTTGCGGCGTGGCCGCTCTTGTTTCCCTCGCCGCCGGCAAACCCGACGATCCTTCCCTTTCCGACAAGTTCTTGCGTTGCTGGCCTCCTCCCCCCAACAACGGTAGTCACCCTGCAGGCTTCCTCAAATGGTTCCTCATAGTTGCGCTGTTAGCGGTGATTGCAATGGCCTTGACGGCCATACTGGTGAGATTCGTGTGGCAGAAGAGGCCCCCGAAAGCGGCGGCATTGAAAGAAATAACAACGTGGTCGGGGATGTACTGGTTCTCGAAGGCGGAGATAGAGAACGCGATAAACCACGGGAACGAGAGGAAGTGCCTGGGAAGAGGGAGTGCGGGAAAGGTGTTCAAAGGGATTCTTCCCAGCGGTCAAGTGGTGGCCATCAAGCACCTCAACAGAACCAACAGCTCCGATTCTTTCACTCGCGAAGTGGAAGGCCTTTCCAGGCTTCGCCATCCCAATCTGGTTTGCCTCTTTGGCTGCTGCATTGATGGTGGGGAGAGATATCTAGTGTATGAATACTGTGCAGAAGGCAATCTAGCGCAACATCTCTTGAGAAGGGACAGCCATTTGACATGGGAAACAAGGGTTAGGATTTTAAGGGACTGCTCCTTCGCTCTCAAATATCTGCACCATCATATTGAGGGCTGCGTAGTCCACAGAGATATCAAGCTCACAAACATACTATTGACGGAGAATTTGCAAGCGAAACTGTCGGATTTTGGGTTGGCAAAGATGTTGGGGATGGAAGAGAGCAAAGTGTTCACGGATGTAAGAGGAACCATAGGGTACATGGATCCGGAGTACATGAGCAATGCCAAGTTAACATGTGCCAGTGACGTCTATAGTTTTGGAATAGTTGCCTTGCAAATTCTATCGGGTCAGAAGGTGATAGAGTTAGATCTGGATGCCAGAGATCAACTCACTAGGAAGGCGAGAGACGTGAGCATGGGAAAGCGACCAATATCGGATTTCGAAGACCCCAGGCTGAAGGGACAAGTAAACATGGCAGACTTTGAGGCCATCTTACATATTGCAGTTCTGTGTGTCGCCAAATCAAGCAAAGGGCGCCCAACCATTGAGGTTGTGTTCGAGGAATTGGATAAGGCCTATAAGAACACCCTTGCCCACTCGGTATATATTAATTAA 1842 0.5244 MIARAGDELVMVSREYPWMADTHKESPRGKQAYMCGRPSLGTLSKDLEMTALKLLPFIHIIFLLCSFRRPVAAQCVLNLSAYPYVGYQECGRVQDQMDQWDGFPNSLCCRNALTVFSQALALQARNSPQQAALFIPNTQWDACSNAFYLRQGISPDSCGFHSLYLGASKCSNLELPDIQGQQFYQTALDQCGHFDRPSPHSCAGCVSAVLNIRDSLYDQLVGSQDIPLERAVCGVAALVSLAAGKPDDPSLSDKFLRCWPPPPNNGSHPAGFLKWFLIVALLAVIAMALTAILVRFVWQKRPPKAAALKEITTWSGMYWFSKAEIENAINHGNERKCLGRGSAGKVFKGILPSGQVVAIKHLNRTNSSDSFTREVEGLSRLRHPNLVCLFGCCIDGGERYLVYEYCAEGNLAQHLLRRDSHLTWETRVRILRDCSFALKYLHHHIEGCVVHRDIKLTNILLTENLQAKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMSNAKLTCASDVYSFGIVALQILSGQKVIELDLDARDQLTRKARDVSMGKRPISDFEDPRLKGQVNMADFEAILHIAVLCVAKSSKGRPTIEVVFEELDKAYKNTLAHSVYIN 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0025 613 Pfam SPARK 72 216 IPR043891 -
Lele05g0025 613 Gene3D Phosphorylase Kinase; domain 1 305 405 - -
Lele05g0025 613 FunFam Cysteine-rich receptor-like protein kinase 40 305 405 - -
Lele05g0025 613 ProSiteProfiles Protein kinase domain profile. 332 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g0025 613 Pfam Protein kinase domain 335 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g0025 613 SMART serkin_6 332 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g0025 613 Gene3D Transferase(Phosphotransferase) domain 1 407 610 - -
Lele05g0025 613 SUPERFAMILY Protein kinase-like (PK-like) 311 598 IPR011009 -
Lele05g0025 613 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 249 600 - -
Lele05g0025 613 FunFam probable receptor-like protein kinase At5g59700 406 613 - -
Lele05g0025 613 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0025 Lele-ChrLele05 200332 202615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0025 278 608 Receptor kinase-like Gene Family AT5G48740 37.360 6.26e-55 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Lele05g0025 Pkinase 4.1e-45 CL0016