Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0024 ATGAATTGTTTCTCGTGTTTCACGTCCCAGAAAAGTAAGAAAAACCTTGCCGCTGGAGACCCTGAATCTGCACCCCAAGATCATGTCGCTTCTAAACCGCCGGATAATGGAAACCAAGCTCAGGCCCCAACTATTCAGGCTCAGACGTTCACTTTCCGCGAGCTAGCAACCGCCACCAAGAATTTCAGGCAGGAATGCCTGTTGGGTGAAGGTGGATTTGGCAGAGTGTACAAGGGCACCATTCCGGCAACCGGCAAGGTGGTCGCTTTGAAGCAATTGGACCGAAATGGGATGAATGGCAGCAAGGATTTTCTGACGGAGGTTGCAGTTTTGAGTCGCCTTAACCATGAAAACCTGGTGAATCTAGTCGGTTATTGTGCCGATGGGGACCAACGTCTTCTGGTGTATGAATATATGTCAGGGGGCTCTGTATATGATCGTCTTTTTGAGCCGGAGGAAGGCAAGTCTCCATTGGATTGGTTCAACAGAATGAAAATAGCTTCGGGGGCAGCGAGAGGACTGGAGTATTTGCATGATACGGCCAATCCACCTGTTGTTTACAGGGACTTGAAATCCTCGAATATCTTGCTGGATGACGATCTCAACCCCAAACTATCTGATTTTGGGCTCAACAAGCTTTCCGGGGGAGACAAGACAAATCTTATATCACCCGGAGTTACGGGTACTTATGGCTACTCTGCTCCCGAGTATACAAGGACCGGACACCTCACCTTGAAATCAGACGTCTACGGTTTTGGAGTCGTGCTGCTGGAGCTCATCACCGGAAGACGAGCCATTGATACTACCAAGCCCAATGAGGAGCAAAATCTAGTTTCATGGGCACAACCCTTATTCAGAAATCCAAAACAATTCCCAGAAATGGCGGATCCGCTCCTGAACAAGCATTTCCCGGAAAAGGATTTAAATCAAGCGGTAGCAGTGGCCGCCATGTGCCTCCAGGAGGAAGAAGGGGCGAGGCCTTTGATGAGTGACGTGGTAACTACTCTGAGTTTCCTGTCCATGGTGCCACCGGAGGTAATTCCGGCATCGGTGTCGCCAGCCACCTTGCCACCGCAGGATGATGGTTCCGAAGAGGAGTCGGAGGAGGAGTCGGAGGAGGAGGAAGAGGAGGAGGAAGAGGAGTCTGATTCTGATGGGACGGGAAGCAGATCAAGCCGAAGAAGCAGTGCGAGTTGGGAGGAGGGAAGCGTGACATCCAGCAAGAAATCGCGAAATTTAAGCAAGAAGAAAAGTAGCTCCAGAGATTTAAAGCAGAAGAGCAGCAAGAAGGGGGGAGGAAAAGTGTCGAGCAGAAAGAGCAGTGGAAAATCATCAAGAAGCAGGAAGATGAGCACGGAATCGGAGGAAGGAGGAGGAGAGGGAATGCACGAGAGAGGGAGCAGCAGGATGTCCCAGAGAGATATGTCGTTTGGGCAAAGCATGGGCCGCAGCGGCGGCGGTGACGACAGCGACAAGGGCTCACCGGAAGGGGCCAACCAGCGGCTGCAGCACGCCCATACGGCCAAACAACGTCCCAAGAATGGGCACAGGGAACGACTGGCCGCTTCTAGCGCCAAAGTGAAAAATTCGATATATGCTTTCAAATTGTTTACCCAGATGGTAGATATGCAATACGTGTACCGTGTTGCTAATGCCTTGTGTCAAGCTCAAGCAATAATCAAATCGGAGGACATAGAGGTGGATGTTCCGGATATGCTCTGA 1722 0.5099 MNCFSCFTSQKSKKNLAAGDPESAPQDHVASKPPDNGNQAQAPTIQAQTFTFRELATATKNFRQECLLGEGGFGRVYKGTIPATGKVVALKQLDRNGMNGSKDFLTEVAVLSRLNHENLVNLVGYCADGDQRLLVYEYMSGGSVYDRLFEPEEGKSPLDWFNRMKIASGAARGLEYLHDTANPPVVYRDLKSSNILLDDDLNPKLSDFGLNKLSGGDKTNLISPGVTGTYGYSAPEYTRTGHLTLKSDVYGFGVVLLELITGRRAIDTTKPNEEQNLVSWAQPLFRNPKQFPEMADPLLNKHFPEKDLNQAVAVAAMCLQEEEGARPLMSDVVTTLSFLSMVPPEVIPASVSPATLPPQDDGSEEESEEESEEEEEEEEEESDSDGTGSRSSRRSSASWEEGSVTSSKKSRNLSKKKSSSRDLKQKSSKKGGGKVSSRKSSGKSSRSRKMSTESEEGGGEGMHERGSSRMSQRDMSFGQSMGRSGGGDDSDKGSPEGANQRLQHAHTAKQRPKNGHRERLAASSAKVKNSIYAFKLFTQMVDMQYVYRVANALCQAQAIIKSEDIEVDVPDML 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0024 573 MobiDBLite consensus disorder prediction 349 522 - -
Lele05g0024 573 PANTHER OS07G0668900 PROTEIN 3 342 - -
Lele05g0024 573 MobiDBLite consensus disorder prediction 361 384 - -
Lele05g0024 573 MobiDBLite consensus disorder prediction 446 470 - -
Lele05g0024 573 CDD STKc_IRAK 68 336 - -
Lele05g0024 573 Gene3D Phosphorylase Kinase; domain 1 34 138 - -
Lele05g0024 573 Gene3D Transferase(Phosphotransferase) domain 1 139 342 - -
Lele05g0024 573 MobiDBLite consensus disorder prediction 10 43 - -
Lele05g0024 573 MobiDBLite consensus disorder prediction 389 409 - -
Lele05g0024 573 SUPERFAMILY Protein kinase-like (PK-like) 41 341 IPR011009 -
Lele05g0024 573 FunFam probable serine/threonine-protein kinase RLCKVII 34 138 - -
Lele05g0024 573 Pfam Protein kinase domain 64 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g0024 573 ProSitePatterns Protein kinases ATP-binding region signature. 68 91 IPR017441 GO:0005524
Lele05g0024 573 SMART serkin_6 62 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g0024 573 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672|GO:0006468
Lele05g0024 573 Coils Coil 360 384 - -
Lele05g0024 573 FunFam Serine/threonine-protein kinase PBS1 139 350 - -
Lele05g0024 573 ProSiteProfiles Protein kinase domain profile. 62 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0024 Lele-ChrLele05 196850 200238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0024 1 398 Glycoside Hydrolase AT3G07070 59.427 5.89e-159 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lele05g0024 Pkinase 1.2e-45 CL0016